Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00937 ATGGAGGAGCAATCCCTGTCTTCAATTCCGGGATCAACTAGTCGAATTGATAACTCATACCTCGGATCACCACAGGTTGCTGGATCATTCTTAAGTCGGAACGGATGTTTTATGTTTGTGATTTTGCCGCATGAAGAAGTAGTACAACTCAGAAACAGCAATAATATGGACCGCGGTGCACAAGACATCAAATCTTGTCCAATTTATGTTGCTGACTCAGATAATGAAAGTATAGTTGAATCTGATCTTGTATACTGCATCAAACTGTTTGACCGCATATCTTCATTCCATGCAGGTAGTATTCAATACAACATAATCCCATTTTCATGGTCAGGAACAAATTTTGACATACGATGCTTGAAATGTGAACACAAATCAAAGAAGAAGATTACATTCATTATTGTATCCTCTGCAGGTGTAATCATCGGTTCAACTTTGCTAGTGTTTTCCCTCGGTGCTATTGTTCGAATTCATCTCCATTTCAAGATGAAAGGTGAAGATCATACAAGAATCGAAAACTTTTTGAAGGATTACAAGGCTTTGAAGCCAACCAGATTCTCCTATGCTGACATAAAGAGAATCACAAATAAATTTAAGGATAAGTTAGGCGAAGGAGCTCATGGAGTTGTTTACAAAGGTAAATTATCGAGCGAAATTGTGGTTGCTGTTAAGATGCTCAATAACGCAGAGGGAGATGGCAAAGAGTTCATAAATGAAGTGGGAACTATGGGGAAAATTCACCATCTCAATGTTGTACGTTTGCTTGGCTATTGTGCCGATGGATTTCACCGTGCTCTAGTCTATGACTTTTTCCCAAATGGTTCGTTGCAGAAATTCATTTCTCCTGCTAGCAACAAAGATAGTTTCCTTGGATGGGACAAGTTGCAGCAAATTGCTCTAGGCATAGCCAGTGGAATTGAATATCTTCATCAGGGTTGTGATGAAAGAATTCTTCACTTTGACATCAATCCTCATAATGTCTTGATAGACGACAGTTTCATCCCAAAAATTACAGACTTTGGTTTGGCTAAGATATGCTCGAAAAATCAAAGTATTGTATCTATGACAGCAGCTCGAGGAACATTAGGATACATGGCACCTGAAGTCTTTTCCAGAAACTTCGGAAATGTCTCTTATAAGTCTGATATATATAGCTATGGTATGTTGTTATTGGAGATTGTTGGAGGAAGAAAGAATACAAACACAACCACAAATGAAGATAACTTTCAAGTTTTGTATCCAGATTGGATCCATAGTTTGCTTGAAGGAGGAGACATACAAATTCCTATAGATGAGGAGGGAGATTTTAGAATTGCAAAAAAAATGGCAATCGTTGGACTTTGGTGCATTCAATGGCAACCTATGCACCGTCCGTCGATGAAAACTGTGTTGCAAATGCTGCAAGGAGATGGAGACAAGTTAAAAGTTCCCTCCAACCCTTTTGGACCTACAACTTCAGCTAATACAACTACTAATATTGTTGCAGAACGTATAAACTTGGAGCTTGAAGTGATTGAAGAAATAAATTAG 1530 0.3837 MEEQSLSSIPGSTSRIDNSYLGSPQVAGSFLSRNGCFMFVILPHEEVVQLRNSNNMDRGAQDIKSCPIYVADSDNESIVESDLVYCIKLFDRISSFHAGSIQYNIIPFSWSGTNFDIRCLKCEHKSKKKITFIIVSSAGVIIGSTLLVFSLGAIVRIHLHFKMKGEDHTRIENFLKDYKALKPTRFSYADIKRITNKFKDKLGEGAHGVVYKGKLSSEIVVAVKMLNNAEGDGKEFINEVGTMGKIHHLNVVRLLGYCADGFHRALVYDFFPNGSLQKFISPASNKDSFLGWDKLQQIALGIASGIEYLHQGCDERILHFDINPHNVLIDDSFIPKITDFGLAKICSKNQSIVSMTAARGTLGYMAPEVFSRNFGNVSYKSDIYSYGMLLLEIVGGRKNTNTTTNEDNFQVLYPDWIHSLLEGGDIQIPIDEEGDFRIAKKMAIVGLWCIQWQPMHRPSMKTVLQMLQGDGDKLKVPSNPFGPTTSANTTTNIVAERINLELEVIEEIN 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00937 509 Pfam Protein kinase domain 199 465 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu01g00937 509 PANTHER RUST RESISTANCE KINASE LR10-RELATED 58 509 IPR045874 GO:0004672
Tsu01g00937 509 Gene3D Phosphorylase Kinase; domain 1 171 270 - -
Tsu01g00937 509 ProSitePatterns Protein kinases ATP-binding region signature. 202 224 IPR017441 GO:0005524
Tsu01g00937 509 SUPERFAMILY Protein kinase-like (PK-like) 179 467 IPR011009 -
Tsu01g00937 509 ProSiteProfiles Protein kinase domain profile. 196 482 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu01g00937 509 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 58 509 - -
Tsu01g00937 509 Gene3D Transferase(Phosphotransferase) domain 1 271 477 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g00937 Tsu-Chr1 8579002 8581935 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g00937 134 480 Receptor kinase-like Gene Family AT1G66910 46.499 1.12e-105 328
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Tsu01g00937 Pkinase 2.7e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g00937 - - lja:Lj0g3v0145559.1 595.504