Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00935 ATGATTTACAGTCACGGTACTTCTTCGTTCATGATAGCAATGACATTAATGCTAGTTCCGCTGTTTGCGCATCAACGTGAACAGAATGTCCGGTCCATTGGATGTCCTTTCAATCTATCTTGTACACAAGATAACAAAAGGATTCTTGAACTACCTGTTCATGCAGTCCCTATAAAACTCCGCGTAAGTTACATTAACTACACATCCCAAGTACTCGAAGCACATGATCTAGAAAATTGTCTTCCACGACTCTTACTTCGGCAACACAATTTCTCTTCATCAATTTATCCTTTTCAGATTGTCTCTTCAACGCCTTCACAATTTGATGATTTTACCAATATTAGTTTCTTTGATTGTTCTGCACTACGAAAACATCACCTGACAGATGACTATATATATCATGCGAATTACGAATATGCGCAGCAGGACATGATCACTTGCCCAATTTATGTCGCAGGATTTTACGAAGATATAGTTGAATCGAACCTTGTATCTTGCACCAAACTGCCCGAACGAGTTTTTCCCCTTAATCTTCCGGGAGATTCTGTGTATGGGATACAACAAAACTCAATGTTACTATCATGGTCAGAAACAAATCTTGACAAAAGATGCTTAGAATGTAAGCACAGATCAAAGAAGAAGACTATAACCATTATTTTGTCTTCTGCAGGTGTAATCATTGGTTCGACCATGCTCGTTCTTCTATTTGGTGCCATTTTCCAAATATATTGGTATTTTAAGATGAAAGGTGAAGATCATGAAAGAATTGAAAACTTTTTGAAGGATTACAGAGCTTTGAAGCCAACTAGGTTCTCTTACGCAGACTTAAAGAGaattacacataaatttaaAGATAAGATAGGCGAAGGGGCTCATGGAGCTGTTTATAAAGGTAAATTGTCGAACCAAATTCTAGTTGCTGTGAAGATTCTTAATAATGCAGAGGGAGATGGGAAGGAGTTCATAAATGAAGTGGGAACCATGGGAAAAATTCACCATCTCAATGTGGTTCGTTTGCTTGGCTTTTGCGCAGATGGATTTAGCCGTGCTTTAGTCTATGACTTTTTCCCAAATGGTTCGTTGGAGAAATTCATTTCTCCTTCGAATAACAAAGATAATTTCCTTGGATGGGAAAAGTTACAACAAATTGCTCTAGGCATAGCTAATGGAATTGAGTATCTCCACCAAGGATGTGATCAAAGAATTCTACACTTTGACATCAATCCTCATAATGTTTTGATAGATGACAATTTCACTCCCAAAATCACAGATTTTGGTTTGGCTAAGATGTGTTCCAAAAATCAAAGTATTGTATCCATGACTACAGTTAAGGGAACATTAGGCTACATGGCACCTGAAGTATTTTCTAGAAACTTTGGGAATGTGTCATATAAGTCTGATATATACAGTTACGGTATGCTGTTATTGGAGATGGTTGGAGGAAGAAAGAATACAAAAACAACCGGTGGCGAAGAAAATGTTAAAGTTGTGTATCCAGATTGGATCCATAATTTGCTTGAAGGGGGAGATATACAAATCCCTATCGATGAAGAGGGAGATTTCAGAATTGCAAAAAAATTGGCAACCGTCGGACTTTGGTGTATACAATGGCACCCTTTGCATCGCCCGCCAATGAAAACTGTTATACAAATGCTTCAAGGAGAGGAAGACAAGTTAAAAGTACCGAGCAATCCATTCGGACCAACAACTACTACAATTGCTAATACTGCCATAGAACGTATGAATTTGGAGTTGGATGTGATTGAAGAATTAGATTAG 1779 0.3766 MIYSHGTSSFMIAMTLMLVPLFAHQREQNVRSIGCPFNLSCTQDNKRILELPVHAVPIKLRVSYINYTSQVLEAHDLENCLPRLLLRQHNFSSSIYPFQIVSSTPSQFDDFTNISFFDCSALRKHHLTDDYIYHANYEYAQQDMITCPIYVAGFYEDIVESNLVSCTKLPERVFPLNLPGDSVYGIQQNSMLLSWSETNLDKRCLECKHRSKKKTITIILSSAGVIIGSTMLVLLFGAIFQIYWYFKMKGEDHERIENFLKDYRALKPTRFSYADLKRITHKFKDKIGEGAHGAVYKGKLSNQILVAVKILNNAEGDGKEFINEVGTMGKIHHLNVVRLLGFCADGFSRALVYDFFPNGSLEKFISPSNNKDNFLGWEKLQQIALGIANGIEYLHQGCDQRILHFDINPHNVLIDDNFTPKITDFGLAKMCSKNQSIVSMTTVKGTLGYMAPEVFSRNFGNVSYKSDIYSYGMLLLEMVGGRKNTKTTGGEENVKVVYPDWIHNLLEGGDIQIPIDEEGDFRIAKKLATVGLWCIQWHPLHRPPMKTVIQMLQGEEDKLKVPSNPFGPTTTTIANTAIERMNLELDVIEELD 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00935 592 ProSiteProfiles Protein kinase domain profile. 281 567 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu01g00935 592 SUPERFAMILY Protein kinase-like (PK-like) 263 552 IPR011009 -
Tsu01g00935 592 PANTHER RUST RESISTANCE KINASE LR10-RELATED 23 591 IPR045874 GO:0004672
Tsu01g00935 592 ProSitePatterns Protein kinases ATP-binding region signature. 287 309 IPR017441 GO:0005524
Tsu01g00935 592 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 23 591 - -
Tsu01g00935 592 Gene3D Transferase(Phosphotransferase) domain 1 356 564 - -
Tsu01g00935 592 Gene3D Phosphorylase Kinase; domain 1 255 355 - -
Tsu01g00935 592 Coils Coil 588 592 - -
Tsu01g00935 592 Pfam Protein kinase domain 283 550 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g00935 Tsu-Chr1 8565794 8567745 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g00935 224 565 Receptor kinase-like Gene Family AT1G66910 46.552 3.93e-103 324
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Tsu01g00935 Pkinase 1.9e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g00935 - - adu:110273083 660.218