Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00932 ATGTCACTGTTCACAATAATCGTTGCACTGCTGCTGCAAGTGAACCTTGGAAATGGTCTGACTGATGCTTCCATTCGATGTCCCTTCAAGCTCAACTGCACACATAACATGAAGATTCTTGAACTTCCTACTCATCCAGTCCCAATAAAACTCACAATCACTGAAATTAGTTATAGAGATCAATGGTTAGATCTATCTGATCCCGGAAATTGTTTACCGAAACTCATCCTTGATCACAATCTTTTATCAATACTATTTCCTTTAAAGTTATATTATGactttaaagaaaatattagtTTCTTCAATTGTTCTTCAGTAGTACAACTCAGAAATAGATATTATATTAACAATGATGCACAAGATATTAAATCTTGTCCAATTTATGTTGCTGATTCAGATCTCGAAAGTATAATTGAATCTGATCTTGTATACTGCATCAAACTGTTGGACCGTGTACCTTCAATTGACGCAGATAGTATTCAACATAACAGAATCTCATTAACATGGGCAGCAACAAATTTTGATATACGATGCTTGAAATGTGAACACAAATCAAAGAAGAAGACTACACTCATTATTTTATCCTCTGCAGGTGGAATCATCGGTTCAACTTTGCTATTGTTTGCCCTCGGTGCTATTGTTCAAATTCATCTTCATTTCAGGATGAAAGGCGAAGATCATACAAGAATCGAAAACTTTTTGAAGGATTATAAAGCTTTAAAGCCAACCAGATTCTCGTATGCTGACATAAAGAGAATCACAAATAAATTTAAGGATAAGTTAGGCGAAGGAGCTCATGGAGCCGTTTACAAAGGTAAATTATCAAACCAAATTGTGGTTGCTGTTAAGATGCTCAATAACGCAGAGGGAGATGGGAAAGAGTTCATAAATGAAGTGGGAACTATGGGGAAAATCCATCATCTCAATGTTGTACGTTTGCTTGGCTATTGTGCCGATGGATTTCACCGTGCTCTAGTCTATGACTTTTTCCCAAATGGTTCGTTGCAGAAATTCATTTCTCCTCCTAGCAACAAAGATAGTTTCCTTGGATGGGACAAGTTGCAGCAAATTGCTCTAGGCATAGCCAGTGGAATTGAATATCTTCATCAGGGTTGTGATGAAAGAATTCTTCACTTTGACATCAATCCTCATAATGTCTTGATAGACGACAGTTTCATCCCAAAAATAACAGACTTTGGTTTGGCTAAGATATGCTCGAAAAATCAAAGTATTGTATCTATGACAGCAGCCCGAGGAACATTAGGATACATGGCACCTGAAGTCTTTTCCAGAAACTTCGGAAATGTCTCTTATAAGTCTGATATATATAGCTATGGTATGCTGTTATTGGAGATTGTTGGAGGAAGAAAGAATACAAACACAACCACAAATGAAGATAACTTTCAAGTTTTGTATCCAGATTGGATCCATAGTTTGCTTGAAGGAGGAGACATACAAATTCCTATAGACGAGGAGGGAGATTTTAGAATTGCAAAAAAATTGGCAATCGTTGGACTTTGGTGCATTCAATGGCAACCTATGCACCGTCCGTCGATGAAAACTGTGTTGCAAATGCTGCAAGGAGATGGAGACAAGTTAAAAGTTCCCTCCAACCCTTTTGGACCTACAACTTCAGCCAATACAACTACTAATATTGTTGCAGAACGTATAAACTTGGAACTTGAAGTGATTGAAGAAATAGATTAG 1707 0.3685 MSLFTIIVALLLQVNLGNGLTDASIRCPFKLNCTHNMKILELPTHPVPIKLTITEISYRDQWLDLSDPGNCLPKLILDHNLLSILFPLKLYYDFKENISFFNCSSVVQLRNRYYINNDAQDIKSCPIYVADSDLESIIESDLVYCIKLLDRVPSIDADSIQHNRISLTWAATNFDIRCLKCEHKSKKKTTLIILSSAGGIIGSTLLLFALGAIVQIHLHFRMKGEDHTRIENFLKDYKALKPTRFSYADIKRITNKFKDKLGEGAHGAVYKGKLSNQIVVAVKMLNNAEGDGKEFINEVGTMGKIHHLNVVRLLGYCADGFHRALVYDFFPNGSLQKFISPPSNKDSFLGWDKLQQIALGIASGIEYLHQGCDERILHFDINPHNVLIDDSFIPKITDFGLAKICSKNQSIVSMTAARGTLGYMAPEVFSRNFGNVSYKSDIYSYGMLLLEIVGGRKNTNTTTNEDNFQVLYPDWIHSLLEGGDIQIPIDEEGDFRIAKKLAIVGLWCIQWQPMHRPSMKTVLQMLQGDGDKLKVPSNPFGPTTSANTTTNIVAERINLELEVIEEID 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00932 568 Gene3D Phosphorylase Kinase; domain 1 230 329 - -
Tsu01g00932 568 Gene3D Transferase(Phosphotransferase) domain 1 330 536 - -
Tsu01g00932 568 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 15 568 - -
Tsu01g00932 568 SUPERFAMILY Protein kinase-like (PK-like) 238 526 IPR011009 -
Tsu01g00932 568 Pfam Protein kinase domain 258 524 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu01g00932 568 ProSiteProfiles Protein kinase domain profile. 255 541 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu01g00932 568 ProSitePatterns Protein kinases ATP-binding region signature. 261 283 IPR017441 GO:0005524
Tsu01g00932 568 PANTHER RUST RESISTANCE KINASE LR10-RELATED 15 568 IPR045874 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g00932 Tsu-Chr1 8552583 8554475 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g00932 187 539 Receptor kinase-like Gene Family AT1G66910 45.528 2.94e-104 326
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Tsu01g00932 Pkinase 4.2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g00932 - - adu:110273083 654.055