Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00926 atGAAACAGAACTCAATGCTCACAAAACTATGCCAAATCCAAATTTTAATGGTAACGATATCAATATCGATGGTAACAATAGTATTTGCATCGGATGAATCCTTTTCTACATCGCTACCCGGTTGCAAAAACACATGTGGAAATGTCACAATTCCATATCCATTTGGTATATCAACTTCATCAATACCAAATCATGGAAATTGTTTCCTAGAGGAAAAATTTAATCTCACATGTGAAGATGACACAAAATTAAAGTGGGGCGATGTACAAGTATACAACATAAGCATCCTCGAAGGACAAATTGAAGTGTCGTTTTATATATCCCGTTATTGTGATAATGGAACATCGAATCAACCCACCTTAGACACAGCCAGTTTCAGGATATCCAGCAAGGAAAATAAGTTCGTAACGGTTGGTTGTGACAGTTATGGTTATCTCAACAGCATTTTCAGCGGAAAAACATATTCCACTGGTTGCTTAACAAGATGTTATGGTAATCGAGAAGGAATTGAAAACGGAACATGTTCAGGTATCGGTTGTTGTCAAGTTGATATTCCAGATATGATGAGGAATATAAGTGTACAAGTTTCTGAATTTCCTAATTCAACGGAACGTGCTGGGTGTAGCTATTCTTTTATTGTTAAAGATGGTTTCTATAATTTTTCTCTTGCTCATTTGGATGGTTTTCCTAATAAGGAGCTTCCATTGATTCTTGACTGGAGTGTTGGAATGGAAAATTGTTCGGTTTCAAAGGGCTATGCTTGCAAGAATAATAGTGATTGCTTTAATTCGGAAATTGATTCTGGTGGTTACCGGTGTAAATGTAAGGTTGGTTATACAGGAAACCCCTATCATCCAGATGGCTGCAAAGACATTGATGAATGTAAGACAAATAACACATGCATAACTAAAACAAATTGTCACAACACGGAAGGGAATCGTGAATGCATTTGTCCAGATGGACGACCAGAAAATGGAACATTTGCAGGAGGGTGTCAAACTCATACACGAGATGATCTTATTACCAAGATTGCGATTGGAGCAAGTGCTGGACTCATTGTTCTATTTGTGGCTATTTCAACTCTATACTTGACATACCAAAAAAGGAAACTCATCAAACTAAAGCAAAAATTCTTTCAACAAAATGGAGGTTCTATTTTGCTACAACAATTATCTACAAGAGATGACTCATCGCAATCGGCTCAAATATTCACGGAAGAAGAACTTAAAAAAGCCACCAAAAACTACGATGAAAGCTTAATCATTGGTAGAGGAGGTTTTGGCACAGTCTTCAAAGGGATTTTACCTGACAACAAAATCGTCGCTGTCAAAAAATCCAAAGTAATCGACACAAATCAAATTGAGCAATTCATTAACGAGGTAGTTGTTCTATCCCAAATAAATCATAGGAATGTCGTCAAACTCTTAGGATGTTGTTTAGAGACAGAAGTTCCTTCCTTGGTTTACGAATTCGTTAGCAACGGTACACTTTTCGACTTCATACAAAGTACTAAAGACGAAGAAAATAATCCAACATGGAAAACACGTTTAAGGATAGCAGCAGAGACAGCCGGAGCTCTGTCGTATCTACATTCGGCTGCTTCAATACCAATTATTCATAGAGATGTTAAGAGTACAAACATTCTCTTGGATGAAAATTACACTGCAAAAGTTTCCGATTTCGGAGCTTCAAGATTGGTTCCACTTGACCAAACCGAGATAGCGACAATGGTGCAAGGAACTCTTGGATATTTAGATCCAGAGTATATGCAAACACATCAATTAACCGAAAAAAGTGATGTTTATAGCTTTGGTGTAGTTCTCGCTGAGCTTCTAACCGGTGATAAACCTCTTTCTTTTAATAGGCCAGAAGAGAGTATTAGTCTTTCTATGCACTTTTTGTCTTgtttaaaacaagataaaatatttgaagcgATTCAAGTTGGAATTTTGAGTGACGATAACAAGAAGGACATTAAGGAGGTTGCTATTCTTGCAGCAAGGTGTTTGAGACTTAGAGGTGATGAAAGACCTAGCATGAAGGAAGTGGCTATGGAGTTGGATGGTATAAGATTAATGGAGAAGCATCCTTGGAATGACACAGACCAAAATTTTGAAGAGAATCAACGCTTACTTCATGAGGCATCTTCTAGCATTTATAATGAAATTGGTGATGATAGCTCTAATCTTGGATATACTAATGTGTATGATAGCTTGAAAGATCAACCATTGATTGCCTTCGATGATGGAAGATGA 2256 0.3675 MKQNSMLTKLCQIQILMVTISISMVTIVFASDESFSTSLPGCKNTCGNVTIPYPFGISTSSIPNHGNCFLEEKFNLTCEDDTKLKWGDVQVYNISILEGQIEVSFYISRYCDNGTSNQPTLDTASFRISSKENKFVTVGCDSYGYLNSIFSGKTYSTGCLTRCYGNREGIENGTCSGIGCCQVDIPDMMRNISVQVSEFPNSTERAGCSYSFIVKDGFYNFSLAHLDGFPNKELPLILDWSVGMENCSVSKGYACKNNSDCFNSEIDSGGYRCKCKVGYTGNPYHPDGCKDIDECKTNNTCITKTNCHNTEGNRECICPDGRPENGTFAGGCQTHTRDDLITKIAIGASAGLIVLFVAISTLYLTYQKRKLIKLKQKFFQQNGGSILLQQLSTRDDSSQSAQIFTEEELKKATKNYDESLIIGRGGFGTVFKGILPDNKIVAVKKSKVIDTNQIEQFINEVVVLSQINHRNVVKLLGCCLETEVPSLVYEFVSNGTLFDFIQSTKDEENNPTWKTRLRIAAETAGALSYLHSAASIPIIHRDVKSTNILLDENYTAKVSDFGASRLVPLDQTEIATMVQGTLGYLDPEYMQTHQLTEKSDVYSFGVVLAELLTGDKPLSFNRPEESISLSMHFLSCLKQDKIFEAIQVGILSDDNKKDIKEVAILAARCLRLRGDERPSMKEVAMELDGIRLMEKHPWNDTDQNFEENQRLLHEASSSIYNEIGDDSSNLGYTNVYDSLKDQPLIAFDDGR 751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00926 751 ProSitePatterns Serine/Threonine protein kinases active-site signature. 538 550 IPR008271 GO:0004672|GO:0006468
Tsu01g00926 751 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 23 717 IPR045274 GO:0007166
Tsu01g00926 751 PANTHER WALL-ASSOCIATED RECEPTOR KINASE 2-LIKE ISOFORM X2 23 717 - -
Tsu01g00926 751 ProSiteProfiles Protein kinase domain profile. 416 699 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu01g00926 751 SUPERFAMILY Protein kinase-like (PK-like) 397 687 IPR011009 -
Tsu01g00926 751 Pfam Protein kinase domain 418 683 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu01g00926 751 Gene3D Transferase(Phosphotransferase) domain 1 492 715 - -
Tsu01g00926 751 SUPERFAMILY EGF/Laminin 291 322 - -
Tsu01g00926 751 Pfam Wall-associated receptor kinase galacturonan-binding 42 103 IPR025287 GO:0030247
Tsu01g00926 751 Gene3D Phosphorylase Kinase; domain 1 383 491 - -
Tsu01g00926 751 SMART serkin_6 416 693 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu01g00926 751 Gene3D Laminin 243 327 - -
Tsu01g00926 751 ProSitePatterns Protein kinases ATP-binding region signature. 422 445 IPR017441 GO:0005524
Tsu01g00926 751 Pfam Calcium-binding EGF domain 291 321 IPR001881 GO:0005509
Tsu01g00926 751 ProSiteProfiles EGF-like domain profile. 243 290 IPR000742 -
Tsu01g00926 751 CDD STKc_IRAK 422 690 - -
Tsu01g00926 751 Pfam Wall-associated kinase 173 276 IPR013695 GO:0004674|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g00926 Tsu-Chr1 8472719 8477950 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g00926 42 751 Receptor kinase-like Gene Family AT1G21230 46.575 0.0 589
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Tsu01g00926 Pkinase 6.3e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g00926 - - gsj:114381577 927.932
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g00926 01 8472719 8477950 Tsu08g02893 08 44176443 44179730 PCT