Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00917 ATGACAGTGTTAACTCTATTTTCGGATAAATACTTTGTGAAATCAATCAACTACAAAAACTACACAATTCGGCTAATAGATCCCGGAATTCAAGAGGGTGATTGCTCCTCTATTCCTCGATATTACTTATACACTTCAAATTTCACAAGTTATTACTTTTACAGTACTAGCGATGATGGGGATCGATATCAAACCTCCCAAAACAGAATAATTTCTGGAAAAGTTACTTATGGTGATACTATGAACTTACCAATGTTCCAGCACGTAATTTACATGAATTGCAGCAATCCTGTACGAGATAATCCGGTATACGTGGATACAGCTTCTTGCATCAAGTCGAATTCCCAAGGCGGCCATGTTTATGCCATTGCTGGGGATTTGAAGGTCGGTAACTTAAAAGACAATGACTGCCACGCGGAGGTTGTTACTGCGATATCTTTTTTCACTTATCATTACAGACCTTCTTACAGCTCTGCTTATTTGTACATTCCAAATCAAAAGTTTTCATACAGTGAAATTCAAAGGATGTTGGTGGGTGGATTTGAGGTTTCTTGGATGAGTGGTCCTTGTCAAGATCATTGTGGAAAGCCAGATTGCTATTTGAGCGAAACCACTTGGAGTCTTGAATGCTTTCGTCCTTCTCATTATTGTAAAACAACATTGGGATTTCATGTCAGATGCAGTGAAACTCCATCAAAGCTGCGGGCGTTTGTCGAAGGTATTTTGCACGGCATTGCTGTAGGACTACTACATCCAATTGGTTTGACAGTTAACGATCAAACTTCTAATATGCCTGAATCAAAATTTGGTATTATCATAGGAACAATCATTGgatatattttgttatcattCATTATAGTAAGATCTATGTTGGGTCTCATAATAATCTTTGCAAAATTGATACATACATATCGATTAAGGCATACATCAATATATGAAAACATTGAAGATTTTCTTCAAGGCAACTCCCTCATGCCAATAAGGTATTCATACAAAGAGATAAAGAACATGACAAGAGGTTTTAAGGACAAGTTGGGTGAAGGAGGCTATGGTAAGGTTTATAAGGGAAAGCTACGTAGTGGCCCTTTGGTAGCGATAAAGATGTTGGGTAAACTTAAGGGTAACCAAAATGGACAAGATTTCATTAATGAAGTTGCAACCATAGGAAAAATACATCACACGAATGTGGTGCGACTTATTGGATTTTGTGTTGAGGGTTCAAAGCGTGCTCTTGTTTATGATTTCATGCCCAATAGCTCTCTTGATAAATATATTTCCTCTAAAGAAGATCATATTTTCTTAACTTATAAACGAATGTACGACATATCTCTTGGGGTGGCTCGTGGAATTGCTTATTTGCATCGGGGTTGTGAAAtgcaaattttacattttgataTCAAGCCTCATAACATACTTCTTGACAAAGACTTCGTCGCCAAGGTTTCAGACTTTGGTCTTGCAAGACTTTATCCAGTTGAAAATAGCATTGTAACTTTGACTGCTGCTAGAGGAACAATTGGTTACATGGCTCCAGAATTGTTCTACAAGAATATTGGTGGAGTTTCCTATAAGGCTGATGTATATAGCTTTGGAATGCTGTTAATGGAAATAGCAAATAGGAAAAGAAATCTGAACTCAAATGCAGATAATTCAAGTCAAATTTTCTTTCCCTATTGGATTTACAATGAATTGATTGAAGAAAGGGAGATAGAAATGTTCGGAGAAGTTACCGATGAGGAtaagaaaaatgtgaaaaaaatgttCATAATTGCTCTATGGTGTATACAATTGAACCCCAATGATCGTCCTTCAATGGACAAAGTAATAGAAATGCTCGAAGGAGATACTCAAGACATTCAAATTCCTCCAAAACCTTCTCCATATCCAACTGAAATTATTCAAGATCATGTTGCTCGCTCTAGTGAATCTATAtcggatgatgatgatgatgatactgGATCAATTAGTTTTCTTGAGGAAACTATGGAAGATCCTTTATTATAG 2004 0.3548 MTVLTLFSDKYFVKSINYKNYTIRLIDPGIQEGDCSSIPRYYLYTSNFTSYYFYSTSDDGDRYQTSQNRIISGKVTYGDTMNLPMFQHVIYMNCSNPVRDNPVYVDTASCIKSNSQGGHVYAIAGDLKVGNLKDNDCHAEVVTAISFFTYHYRPSYSSAYLYIPNQKFSYSEIQRMLVGGFEVSWMSGPCQDHCGKPDCYLSETTWSLECFRPSHYCKTTLGFHVRCSETPSKLRAFVEGILHGIAVGLLHPIGLTVNDQTSNMPESKFGIIIGTIIGYILLSFIIVRSMLGLIIIFAKLIHTYRLRHTSIYENIEDFLQGNSLMPIRYSYKEIKNMTRGFKDKLGEGGYGKVYKGKLRSGPLVAIKMLGKLKGNQNGQDFINEVATIGKIHHTNVVRLIGFCVEGSKRALVYDFMPNSSLDKYISSKEDHIFLTYKRMYDISLGVARGIAYLHRGCEMQILHFDIKPHNILLDKDFVAKVSDFGLARLYPVENSIVTLTAARGTIGYMAPELFYKNIGGVSYKADVYSFGMLLMEIANRKRNLNSNADNSSQIFFPYWIYNELIEEREIEMFGEVTDEDKKNVKKMFIIALWCIQLNPNDRPSMDKVIEMLEGDTQDIQIPPKPSPYPTEIIQDHVARSSESISDDDDDDTGSISFLEETMEDPLL 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00917 667 Gene3D Phosphorylase Kinase; domain 1 316 415 - -
Tsu01g00917 667 SMART serkin_6 339 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu01g00917 667 ProSitePatterns Serine/Threonine protein kinases active-site signature. 461 473 IPR008271 GO:0004672|GO:0006468
Tsu01g00917 667 Pfam Protein kinase domain 342 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu01g00917 667 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 2 638 - -
Tsu01g00917 667 ProSitePatterns Protein kinases ATP-binding region signature. 345 367 IPR017441 GO:0005524
Tsu01g00917 667 Gene3D Transferase(Phosphotransferase) domain 1 416 622 - -
Tsu01g00917 667 MobiDBLite consensus disorder prediction 617 667 - -
Tsu01g00917 667 ProSiteProfiles Protein kinase domain profile. 339 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu01g00917 667 SUPERFAMILY Protein kinase-like (PK-like) 324 613 IPR011009 -
Tsu01g00917 667 PANTHER RUST RESISTANCE KINASE LR10-RELATED 2 638 IPR045874 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g00917 Tsu-Chr1 8399413 8406819 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g00917 328 652 Receptor kinase-like Gene Family AT5G38280 46.970 7.86e-101 321
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Tsu01g00917 Pkinase 1.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g00917 - - mtr:MTR_1g027050 982.63