Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00915 ATGGCGGCCACAAAACAAGAAGGACCTGCTGTGGGAATTGATCTTGGCACAACATACTCTTGTGTTGCTGTGTGGCTTGATGATAAAAATCAAGTTGAGATTATCCACAACGATCAAGGTAACAGAACTACACCTTCTTTTGTTGCTTTCACTGATGATCAAAAGTTGATTGGTGATGCCGCAAAAAACCGGACTGCTTCTAACCCAACCAACACTGTCTTTGatgCTAAGAGGTTAATTGGTAGAAAGTTTAGTGATTCTGTCGTTCAAAATGATATGGTGTTGTGGCCATTCAAGGTGGTTGGGGGGAATGACAACAAACCCATGATTGTTGTTAATCACAAGGGTGAAGAGAAGAACTTTTGTGCTGAGGAAATATCAGCTATGGTCCTCACAAAGATGCGAGAGGTTGCAGAGAATTTTTTAATGTCCACCGTAAAGAATGCAGTTGTTACTGTGCCTACTTACTTCAATGATTCTCAGCGAAAAGCCACCATAGACGCTGGTACTATTGCTGGCCTTAATGTCATCCGAATACTCAATGAATCAACAGCTGCTGCTATGGCATATGGCCTTGACAAGAGAAGTAACTGTGTTGGCgaacaaaatattttcatctTCGACCTTGGTGGTGGGACTTTTGATGTGTCTCTCATTACAATTGAGGATGAGGTCTTTCATGTGAAGGCCACTGCTGGAAACACTCACCTTGGAGGAGAGGACTTTGATAATAGAATGGTGAACTACTTCGCACAGGAGTTTAAAGACAAGAACAAGGTAGACATTATTGGAAACTTCAGAGCCTTAAGGAGGTTGAGAACAGCATGCGAGAGAGCCAAAAGGAATCTATCTTTTTATTCTTCCACCACCATTGAGGTTGATTCTTTATTTCAAGGAATTGACTTCTTTACATCAATCACCCGTGCCAAGTTTGAGGAAATTAATATGGATATTTTCAACGAGTGTTTGAAAACTGTTGAGAGTTGTCTTACTGATGCCAAGATGGACAAGAGTTCTATCCATGATATTGTCCTTGTTGGTGGTTCTTCTAGAATTCCGAAAATACAACAGATGTTGCAGGAGTTTTTCAAGGGGAAGGAATTATGCAAGAACATCAATCCTGATGAGGTTGTTGCTTTTGGTGCAGCTGTCCAGGCTGCTATTTTGAGTGAAGGCATTAAGAATGTTCCAAAATTGGTTCTGGAAGATGTTACACCGCTGACCCTTGGTACCAGTAATCATTACGATGCCATGTGTGTGATGATTCCTAGGAATACTACTATTCCTGTTAAGAAGACACGCACATATTTTACTAGTGAGGATAACCAAACCAGTGCCTGTATCAGGATTTATGAGGGTGAGAGAACAAGAGCTAGTGATAACGAACTACTTGCTTCTATTAGATTCCATGGCCTCCCAAATGCTCCTCgtgatgaatgttgttttgAGGTATGCTTTGCTGTCGATGAAAATGGTATCTTCATCGTTTCTGCTTATGCAAAATCCATTGGTATTAGAAAAGAGATTAAAATTACTCGTGACAAAATAGGATCGTCatctaaacaaattaaaaaaatgataagagaAGCTGAAAATTACCGTGTCGATGATGAGAAATTTCTAAGGAAGGCCAATGCAATGAAAGCATTAGATAAATGCGTTTACGAGGTGAAGAATGCTCTAAAGAAGAATAATGACCAGGATAGTAAAATAGATGTTCTTGAGAATCAACTGAAGGAGCTTAAGAGTATATTTGAACGCATTACGGAAATTCCTAAGGAAGGCAGCAATTGGTTTTCAAAGTTCTTTTCACAGAGATCATGA 1824 0.3882 MAATKQEGPAVGIDLGTTYSCVAVWLDDKNQVEIIHNDQGNRTTPSFVAFTDDQKLIGDAAKNRTASNPTNTVFDAKRLIGRKFSDSVVQNDMVLWPFKVVGGNDNKPMIVVNHKGEEKNFCAEEISAMVLTKMREVAENFLMSTVKNAVVTVPTYFNDSQRKATIDAGTIAGLNVIRILNESTAAAMAYGLDKRSNCVGEQNIFIFDLGGGTFDVSLITIEDEVFHVKATAGNTHLGGEDFDNRMVNYFAQEFKDKNKVDIIGNFRALRRLRTACERAKRNLSFYSSTTIEVDSLFQGIDFFTSITRAKFEEINMDIFNECLKTVESCLTDAKMDKSSIHDIVLVGGSSRIPKIQQMLQEFFKGKELCKNINPDEVVAFGAAVQAAILSEGIKNVPKLVLEDVTPLTLGTSNHYDAMCVMIPRNTTIPVKKTRTYFTSEDNQTSACIRIYEGERTRASDNELLASIRFHGLPNAPRDECCFEVCFAVDENGIFIVSAYAKSIGIRKEIKITRDKIGSSSKQIKKMIREAENYRVDDEKFLRKANAMKALDKCVYEVKNALKKNNDQDSKIDVLENQLKELKSIFERITEIPKEGSNWFSKFFSQRS 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00915 607 Pfam Hsp70 protein 10 584 IPR013126 GO:0005524|GO:0140662
Tsu01g00915 607 Gene3D Actin; Chain A, domain 4 238 321 - -
Tsu01g00915 607 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 387 571 IPR029047 -
Tsu01g00915 607 PRINTS 70kDa heat shock protein signature 398 417 - -
Tsu01g00915 607 PRINTS 70kDa heat shock protein signature 39 51 - -
Tsu01g00915 607 PRINTS 70kDa heat shock protein signature 479 495 - -
Tsu01g00915 607 PRINTS 70kDa heat shock protein signature 149 169 - -
Tsu01g00915 607 PRINTS 70kDa heat shock protein signature 9 22 - -
Tsu01g00915 607 PRINTS 70kDa heat shock protein signature 372 392 - -
Tsu01g00915 607 PRINTS 70kDa heat shock protein signature 212 222 - -
Tsu01g00915 607 PRINTS 70kDa heat shock protein signature 61 69 - -
Tsu01g00915 607 PRINTS 70kDa heat shock protein signature 340 356 - -
Tsu01g00915 607 Gene3D - 11 386 - -
Tsu01g00915 607 SUPERFAMILY Actin-like ATPase domain 201 390 IPR043129 -
Tsu01g00915 607 ProSitePatterns Heat shock hsp70 proteins family signature 1. 13 20 IPR018181 -
Tsu01g00915 607 Gene3D - 74 129 - -
Tsu01g00915 607 PANTHER HEAT SHOCK 70 KDA PROTEIN 5 564 - -
Tsu01g00915 607 SUPERFAMILY Actin-like ATPase domain 10 194 IPR043129 -
Tsu01g00915 607 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 395 547 IPR029047 -
Tsu01g00915 607 ProSitePatterns Heat shock hsp70 proteins family signature 2. 206 219 IPR018181 -
Tsu01g00915 607 PANTHER HEAT SHOCK PROTEIN 70KDA 5 564 IPR013126 GO:0005524|GO:0140662
Tsu01g00915 607 Gene3D - 195 369 - -
Tsu01g00915 607 Coils Coil 557 591 - -
Tsu01g00915 607 ProSitePatterns Heat shock hsp70 proteins family signature 3. 343 357 IPR018181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g00915 Tsu-Chr1 8385804 8387801 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g00915 3 562 Calmodulin-binding Proteins AT3G12580 66.310 0.0 768
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g00915 K03283 - gmx:102667572 804.668