Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00907 ATGTCACTCACAATATTAGCACTGCTACTGCTAGTGCTAATAAGCCTTGTAAATGGTCAGAGCAATAATAACTCGTCCGATGAATGTCCCTTTCGTCTATCTTGTTCGCGTAACAAGAATCAAACCATTGAGTTTCCAGCAATTCCAGTTTCAGTAAAACTCGTCGTTACTGACATAGATTGTCAATCTCAACAGTTATACATTTCTCACCCACAAAACTGCCTTTCTAGTATCTTTTTAACGAACAATTATTCGTTATTTTATCCTTTCTATAATTCAGACTATTTTCAAGACGATCCCTCTAGCAGCGACAACATTACTTTCTTTAATTGCTCTTCAGTTGGACAACACCATCTCAGAAATGGGGAACAAACAAGGCCCGGCGCGCAAGATATGTCATCTTGCCCAATTTATGTCACTGGTTCCACTGAAAGTGTTATTGAGTTGGACTTATTTCCCTGCACCAGAATGTTTGACAAAGTTTTGCCAATAGATTCAAATTATTATACAAGGGAAAACAATCTCAAATTGAATTGGTCAGAAAAAACTTTTCATAGTCACTGTTTACAATATgaaaaacacaataaattatCAAAGAACACATCCATTATTTTGGTTACAACAGGGGCAATCATTGGTTCAACTATGCTGGTTGTTTTGATTGGTGTTTTCTTTCGAGTATACTTCTATTTTAGAACAAAAGGGGAAGATCAAACAAGACTTGAAAACTTTTTGAAGGATTACGAAGCGTCAAAGCCAACTAGATTCTCTTATGCAGATATCAAGAGAATTACAGACCAATTCAATGAAAAACTAGGCGAAGGAGCTCATGGAGCTGTCTATAAAGGTAAATTATCGACTCAAATCCTGGTTGCTGTGAAAATGCTTAATAATACAGAAGGAGATGGGAGGGAGTTCATAAATGAAGTAGGAACTATGGGGAAAATCCACCATGTTAATGTTGTTCGGTTGCTTGGTTTCTGCGCCGATGGATTTTATCGTGCTTTGGTGTATGACTTTTTTCCGAATGGTTCGTTACAAAATTTCATTTCTCCACCCAACAACAAAGATGCTTTTCTTGGTTGGGACTTATTGCAACAAATTGCTCTAGGTATTGCGAACGGAATTGAGTATCTTCATCAGGGTTGTGATCATAGAATTCTTCACTTTGATATCAATCCTCACAATGTCTTGTTAGATGACAATTTCATTCCAAAAATATCAGACTTCGGTTTAGCTAAGTTGTGCTCAAAAAATCAGAACACTGTATCAATGACTGCAGCTAGGGGAACATTAGGGTACATGGCACCTGAGGTTTTTTCAAGGAACTTTGGAAATGTCTCTTATAAGTCTGATATATACAGTTATGGCATGTTGCTTCTCGAGATGGTTGGAGGAAGAAAGAATACCAAAGTAACTACTGGTGAAGAAAATTTCCAAGTTTTGTATCCAGATTGGATCCACGGTTTACTTGAAGGGGGAGACATTCATATCCCAATTGACGATGAGGGAGATTTTAGAATTGGAAAGAAACTAGCAATTGTGGGACTTTGGTGCATTCAGTGGCACTCGGTGCATCGTCCGTCCATGAAAAATGTGGTGCAGATGCTACAAGGAGAGGTAGACAAGTTAAAAGTTCCCAGCAATCCTTTCAATGCTTCATCTTCTACTAATAGAACTACAAATGCTGCTACAGGAGGTTCTCTGAATTCAGAACTAGATGTGATTCAAGAATTAGATTGA 1743 0.3752 MSLTILALLLLVLISLVNGQSNNNSSDECPFRLSCSRNKNQTIEFPAIPVSVKLVVTDIDCQSQQLYISHPQNCLSSIFLTNNYSLFYPFYNSDYFQDDPSSSDNITFFNCSSVGQHHLRNGEQTRPGAQDMSSCPIYVTGSTESVIELDLFPCTRMFDKVLPIDSNYYTRENNLKLNWSEKTFHSHCLQYEKHNKLSKNTSIILVTTGAIIGSTMLVVLIGVFFRVYFYFRTKGEDQTRLENFLKDYEASKPTRFSYADIKRITDQFNEKLGEGAHGAVYKGKLSTQILVAVKMLNNTEGDGREFINEVGTMGKIHHVNVVRLLGFCADGFYRALVYDFFPNGSLQNFISPPNNKDAFLGWDLLQQIALGIANGIEYLHQGCDHRILHFDINPHNVLLDDNFIPKISDFGLAKLCSKNQNTVSMTAARGTLGYMAPEVFSRNFGNVSYKSDIYSYGMLLLEMVGGRKNTKVTTGEENFQVLYPDWIHGLLEGGDIHIPIDDEGDFRIGKKLAIVGLWCIQWHSVHRPSMKNVVQMLQGEVDKLKVPSNPFNASSSTNRTTNAATGGSLNSELDVIQELD 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00907 580 MobiDBLite consensus disorder prediction 548 567 - -
Tsu01g00907 580 PANTHER RUST RESISTANCE KINASE LR10-RELATED 16 579 IPR045874 GO:0004672
Tsu01g00907 580 Gene3D Transferase(Phosphotransferase) domain 1 341 555 - -
Tsu01g00907 580 ProSitePatterns Protein kinases ATP-binding region signature. 272 294 IPR017441 GO:0005524
Tsu01g00907 580 SUPERFAMILY Protein kinase-like (PK-like) 247 537 IPR011009 -
Tsu01g00907 580 Pfam Protein tyrosine and serine/threonine kinase 268 474 IPR001245 GO:0004672|GO:0006468
Tsu01g00907 580 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 16 579 - -
Tsu01g00907 580 Gene3D Phosphorylase Kinase; domain 1 240 340 - -
Tsu01g00907 580 ProSiteProfiles Protein kinase domain profile. 266 552 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g00907 Tsu-Chr1 8313669 8328433 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g00907 209 550 Receptor kinase-like Gene Family AT1G66910 46.552 1.29e-99 315
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Tsu01g00907 PK_Tyr_Ser-Thr 1.9e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g00907 - - adu:110273083 673.315