Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00862 ATGACAACCATTTTCTCAAGTTCTCGTTTTCTACTAAATACCGTGAAACTCACTTCGCGTTCAAACGCCGTTAATCTGAGAAGAAGTTTCCGTCCATCAGAAATGAACACTTCAGCTAGGGTTTCCAGTAACGGTGACGGCGGCGTAGCTCGTTTCCCAATATCTTCATCGAATGCTTTGATCATTCAGAAAGGAGATATCACAAAATGGTCCATCGATGGTTCCACTGACGCAATCGTAAATCCTGCAAACGAGAGAATGCTTGGAGGTGGTGGTGCAGATGGAGCTATACATAGGGCTGCTGGTCCAGATCTTGTTAGAGCATGCCGGAATGTACCAGAAGTCAGGCCTGGAGTTCGCTGCCCAACGGGGGAAGCAAGGATTACACCAGGTTTTTTGCTGCCTGCTTCTCATGTTATTCATACTGTTGGCCCAATCTATGATGTTGACAGTAATCCTGCTGCTTCTCTAGCAAGTGCTTACAGAAATAGTTTGAGAGTTGCAAAAGAGAACAACATTCAGTACATAGCATTTCCAGCCATATCATGTGGTATCTATGGATACCCTTACGACGAAGCTGCTGCTGTAGCAATTTCTACCATCAAAGAGTTCCAAAATGACTTTAAGGAGGTCCACTTTGTTCTCTTCGCATCTGATATTTATGACATTTGGTTAAATAAGTCGGATGAATTGTTGAAAGATTAG 705 0.434 MTTIFSSSRFLLNTVKLTSRSNAVNLRRSFRPSEMNTSARVSSNGDGGVARFPISSSNALIIQKGDITKWSIDGSTDAIVNPANERMLGGGGADGAIHRAAGPDLVRACRNVPEVRPGVRCPTGEARITPGFLLPASHVIHTVGPIYDVDSNPAASLASAYRNSLRVAKENNIQYIAFPAISCGIYGYPYDEAAAVAISTIKEFQNDFKEVHFVLFASDIYDIWLNKSDELLKD 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00862 234 CDD Macro_OAADPr_deacetylase 60 227 - -
Tsu01g00862 234 Pfam Macro domain 80 197 IPR002589 -
Tsu01g00862 234 Gene3D Leucine Aminopeptidase, subunit E, domain 1 12 234 IPR043472 -
Tsu01g00862 234 PANTHER GANGLIOSIDE INDUCED DIFFERENTIATION ASSOCIATED PROTEIN 2-RELATED 40 233 - -
Tsu01g00862 234 PANTHER MACRO DOMAIN-CONTAINING PROTEIN VPA0103-LIKE ISOFORM X1 40 233 - -
Tsu01g00862 234 SMART YBR022w_8 59 197 IPR002589 -
Tsu01g00862 234 SUPERFAMILY Macro domain-like 59 229 IPR043472 -
Tsu01g00862 234 ProSiteProfiles Macro domain profile. 47 232 IPR002589 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g00862 65 170 C2H2 Transcription Factor Family AT5G01310 35.294 1.23e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g00862 K23518 - gmx:100811169 357.836