Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00845 aTGGATGAAAGTGGTGTTGATGATGAGTTTAAGAGGTGTATTAGAAAGGTGGGTCATGAATGGAGGTGTAAAGAGAAAGCTTTACCTGGAAAAAACCAATGTGAGAAGCACCATGTGTATGGTAGTATTGAGAGATTCAAGAAGAAGGAAAGTAGTTCTGATGAAAAGAAAGGTAGTAAAAGAAAAGGTGAAGAAGAGAGTTTACAAAAtggggttgttgttgttgttgatgatggtggtaaAGGGTTGTTTAGTGGTGGTGATGATGGTGGTTTTGGAGGGATTTTTGGTGAAGGTGAGGtgaatggtggtggtggtagttGTGAAAGTTTTAATCTTTGGCAACAAGATGGTCAACAAGTTGGGGTTTTTGGACAAGAGAGTGGAAATTTAGGTCAATTTCTTGGTGATGGAGTTGAGTTTGTAGGTGGGTTTGTTGAGGATAGGAATAGGGTTAATGGTGGTTTAGGTCAGTCATGTAGTGGTGTAGGTGTATTTGGAAATGCTGGTGGTGTTTCTAATGTTGGTAAAGAAGATAATGGAAATGGTATTGATGGTATTTGTGGAAATGGTTCACTTAGTTTTCCTTCTAATGGAAATGGAGGGTTGGTTGGTGGTGAAGCTGGTTTTGGGGATTTATATGATAGTAGTTTACAAGCACTTCTTGGTCAAGGTAGTAGGGTTTGTGATGAAGATGTGAATTTAGTTGTTGATGGAACTGGTTTTCAAGGGTTAGGTGATGTAAGTGCTAATGATTTTAGAGGTGAGGTTAGTGGGGGTGTTGGAAATGTAGTTCAGTGTGGCGGTAAATTTGAAGGCGAAAAAAATGTTGGTAGTATAGTAGAGGTTCCTGACTCTAAGAATAAGAAGAAAGGGGTTAACTTAGCCTCGGATGGGGAAACTGTTTGTGGAAGTGGTAATGCTGGAGCGATTGGGACGAGCACTGTTGaagttttagagaatgaaaaatCAGTGTTTTGTGGTAAGGCTGATCAGGTAGGTGTAGCTGAGGATGAGATTGTTGCAAGGACGAAGAAGCGTGGTCAACCGGAAGATCGGAAGTGTGGAAGGCAGATTATTTTGGCGGTTGGTTATGAAGTTGCTGGGATTGGTGACATTAACGAACCAAGAAAGCGTGGTAAAAGATCAAAGGGTTCGGTAAACAAAGAGAAGAATGTCGAGGAGGTTAGTAGTGAAGTTTCTGGTGCTGGTGAGATAGCTAGGCCAAAGAAGCGTGGTCGGCCAAAAGGTTGGAAACGTAAGAAGGAGGTTGTTATGGAGGTTAGTAACGAGGTTGTTGGTGACGGTGAGATTGCGAGACCAAAGAAGCGCGGTCGACCAAAGGGTTATAACTGTCGAAAGAAGATTGGCATTGAGGTTAGTAATAAAGTTGCTGTTAAAGGTGAGATTGCAGTAGCTATGAAGCCTGATCGATCAAAGGGTTCAATAAAGAAAGTAATAAACGATGGAGTTGATGAGATTGCAACACAAGGTTTAGAAACCAAAATGATGACTGTTCCATGTCAAAAAGGTGCAGACGAGGTTGCAAGTCTAACTAATAAACATGGTCCTGCATTGTGTACAAGGAATAAATTGAGAAGCATTGGATTTGAGGGTCATGAGCATCCAGGAATGTCTAGTGATGTTTGtcttgaagatgatgatggaaCCGCAAATGTTTTTCCAAGTGGTTTGGAGATTACTGCATTGGCTCCTTTATGTGATGAGCAGGGAAAAAGGATTCCTTCGGAAGCCACCAAACATATTGTAAACATGATTGTTAAGTGTGATCGACTGAAGGGATCACCGAACAAGGAGAAAAAACTAGAAGGTCAGGAATTGGCTGTCCAAACCCTTGGTCAAGATGAGGTTCAAAATATTAAACCAAAGATGGGTCGACCAAAAGGGTCTAAAAATAGGAAGAAAAATATTGCTGGTGAAGCTGAAAACGAGTTACATAAGGAAAGGCGTGGGCGTGGTAGGCCAAAGGGTTCTGGAAAAAAGCAAAAGGAGATTGTTGTTCGATTGGATTCGAAGATTGAAAGGCGTGGTAGGCCAAAGGGTTCAGGCAAAAAGCAAAAGCAGGCTGCACGTCGATTGGCTTCACAGATTGAAAGTCAGAAGCTTATGATTGAGGAATCCATTTCACCGCCGGAAGGTCAAGTAAATAAGGAAGAAAAGTCAGATTTTGTCTCGGAGTGCTCAAAGGATTCCAGAATTGAAAAGAGAACAAAAGGATTAATGAGTGAATCCAGCAATGTCCATAAGAGGTGCAGTGAAAGACTAAGAACATTGGTAACCGACCACAAAAATTATCAAGATGTTGAAGTGGAAGAAACTTCTTCTGAAAAGGAGGTGGAAGAAACTATAGACCATGACGGATTGGAATCTTCAAATTTGATGGGTGACTCAGAGATAAAAAAGGAGCGAAGAAATTCAAGGTGCCATCAGTGCTGGAAGAAAAGTAGGACTGGTCTCGTTGTTTGTACCAAgtgcaaaagaaagaaatattgTTATGAGTGCATAGCAAAATGGTACCAAGATAAGACTAGAGAGGAGATAGAGACCGCTTGTCCCTTTTGTCTTGATTATTGCAATTGCCGACTGTGCTTGAAGAAAACTATATCTACAATGGATGAAAATGGTGAAGCAGATAGAGATGCCAAATTACAAAAATTGCTTTTCTTGCTTAAAAAAACTTTGCCCTTACTCCAATATATCCAACGGGAGCAGAAATCAGAATTAGAAGTAGAAGCAAGCATACACGGTTCCCTTATGGTGGAAGAGGAGGATATTCTGCAGGCAGcagttgatgatgatgatcgaGTTTATTGTGACAACTGCAATACATCCATTGTCAATTTCCACAGAAGTTGTACCAATCCATATTGTCGGTACGATCTCTGTCTCACTTGTTGCACGGAACTAAGAAATGGAGTTCATTGCGAAGATCTTCCTGCTAGTGGTGATGTGGAAATGGTTGATACACCACCTGAAACTATTGCTTGGAGAGCAGAGACAAATGGTAGCATTCCTTGCCCTCCAAAAGCTAGGGGAGGTTGTGGTACTGGTATCCTTTCGCTGAGGCGCCTATTCAAAGCTAATTGGATTGACAAATTGATTAGGGGCGCAGAGGAACTTACAATCAAATATAACCCACCCATTGTTGATCTTTCTCTAGGATGTTCAGAATGCCATATTTTTGAGGAAGATGCAGCACATAATTCTGCAAGGAAGGCGGCTTCCAGAGAAACCGGTCATGACAACTTTTTGTACTGTCCAGATGCCGTTGAAATTGGAGACACAGAATTTGAGCATTTCCAAAGACACTGGATAAGAGGCGAGCCTGTTATTGTAAGGAATGCTTATAAAAAGGCTACTGGCCTTAGCTGGGACCCAATGGTGATGTGGAGAGCTTTTAGGGGGGCAAGGAAAATATTAAAAGAGGCAGATACTTTTAAAGCCATCGACTGCTTGGATTGGTGCGAGGTACAAGTTAACGCCTTTCAGTTCTTCAAAGGCTACTTGACAGGGCGTCATTACAGAAATGGATGGCCGGAGATGCTGAAGCTAAAGGATTGGCCTccatcaaatttttttgaagagtGTTTGCCAAGGCATGGTGCTGAGTTTACAGCGATGCTTCCTTTTAGTGATTATACACATCCCAAATCCGGTGTTTTAAACCTTGCCACAAAGCTCCCTGCCGTTTTGAAGCCAGATTTGGGTCCTAAAACATACATTGCTTATGGAGCTGTAGAAGAGTTGAGTAGAGGTGATTCTGTGACAAAACTACATTGTGACATTTCAGATGCAGTCAATATTCTGACACACACAGCCGATGTAAATGTACCAACATGGCAATCCAGAATCATAAAAAAGTTAAAGAAGAAGTATGAAGTTGAAGATATGCGCGAGCTCTATGGTCAAGACATTAAGGGAGCTGGTTCACGTGGACGAAAACGTAAAAAGTGTCGCGTAGGTAATGTCGTAGATCCTAAAATCCCTGAAAAAGAAGACATTAGGGGTAGAGACTCAACCTTACTTGGAAGTCaaggaaaagaagagaaacTTGATGCAGAAGCTTGTGTTCAAGAATTCTCCGAacccaacaaaaataaattagatttaAATGTGAGTGAACAGGAAATCTTTGATTCACCAAGGTTTCCACAATTTGATCTCAATAGCCACGACTCTGGTTTCTTGGTTCCTGGAGCTGATTGTGAGTTGATGGATTATGATAATGCGGAAGAACAACGGTGCTCACCACCAGGTGATGGTTCTTGTAAAGAAATTTCACATAATCAACCTTGTAgtgaaacaaaagaaacaaactttGTCAATGGATTAAATTCTTCAGATGAGTCCAGTTCGGATATTGAGACTGACAAAAGAGAGTCAGTTGAAAATGACATATCGGGTAATGTCGTTCATTTGGAGACTCAATATGGGAGTGCTGTGTGGGACATATTCCGTAGGCAGGATGTACCGAAACTAACGGAGTACCTAAGTAAACACTTTAGAGAGTTTCGCCACGTAACTAGTCTTCCAGTGAGTTATGTGATTCATCCTATTCATGACCAGCACCTTTATTTAAATGAGAAGCACAAAAAGCAACTCAAGCTAGAATATGGTGTTGAACCGTGGACGTTTGAGCAATATCTCGGTGAAGCTGTTTTCATACCTGCAGGATGTCCACATCAAGTGAGAAATAGAAAGTCTTGCATAAAAGTGGCTATGGACTTCGTTTCACCCGAAAATGTCCAGGAATGTGTTCGATTGACAGAGGAATTTCGCTTACTTCCAAAAAATCATAGATCTAAGGAAGATAAATTAGAGATAAAGAAGATGGCACTCTATGCTGCTGATGTTGCTATTGCTGAAGCCACTGAACTCGTGGGAGCTAAATGA 4914 0.3974 MDESGVDDEFKRCIRKVGHEWRCKEKALPGKNQCEKHHVYGSIERFKKKESSSDEKKGSKRKGEEESLQNGVVVVVDDGGKGLFSGGDDGGFGGIFGEGEVNGGGGSCESFNLWQQDGQQVGVFGQESGNLGQFLGDGVEFVGGFVEDRNRVNGGLGQSCSGVGVFGNAGGVSNVGKEDNGNGIDGICGNGSLSFPSNGNGGLVGGEAGFGDLYDSSLQALLGQGSRVCDEDVNLVVDGTGFQGLGDVSANDFRGEVSGGVGNVVQCGGKFEGEKNVGSIVEVPDSKNKKKGVNLASDGETVCGSGNAGAIGTSTVEVLENEKSVFCGKADQVGVAEDEIVARTKKRGQPEDRKCGRQIILAVGYEVAGIGDINEPRKRGKRSKGSVNKEKNVEEVSSEVSGAGEIARPKKRGRPKGWKRKKEVVMEVSNEVVGDGEIARPKKRGRPKGYNCRKKIGIEVSNKVAVKGEIAVAMKPDRSKGSIKKVINDGVDEIATQGLETKMMTVPCQKGADEVASLTNKHGPALCTRNKLRSIGFEGHEHPGMSSDVCLEDDDGTANVFPSGLEITALAPLCDEQGKRIPSEATKHIVNMIVKCDRLKGSPNKEKKLEGQELAVQTLGQDEVQNIKPKMGRPKGSKNRKKNIAGEAENELHKERRGRGRPKGSGKKQKEIVVRLDSKIERRGRPKGSGKKQKQAARRLASQIESQKLMIEESISPPEGQVNKEEKSDFVSECSKDSRIEKRTKGLMSESSNVHKRCSERLRTLVTDHKNYQDVEVEETSSEKEVEETIDHDGLESSNLMGDSEIKKERRNSRCHQCWKKSRTGLVVCTKCKRKKYCYECIAKWYQDKTREEIETACPFCLDYCNCRLCLKKTISTMDENGEADRDAKLQKLLFLLKKTLPLLQYIQREQKSELEVEASIHGSLMVEEEDILQAAVDDDDRVYCDNCNTSIVNFHRSCTNPYCRYDLCLTCCTELRNGVHCEDLPASGDVEMVDTPPETIAWRAETNGSIPCPPKARGGCGTGILSLRRLFKANWIDKLIRGAEELTIKYNPPIVDLSLGCSECHIFEEDAAHNSARKAASRETGHDNFLYCPDAVEIGDTEFEHFQRHWIRGEPVIVRNAYKKATGLSWDPMVMWRAFRGARKILKEADTFKAIDCLDWCEVQVNAFQFFKGYLTGRHYRNGWPEMLKLKDWPPSNFFEECLPRHGAEFTAMLPFSDYTHPKSGVLNLATKLPAVLKPDLGPKTYIAYGAVEELSRGDSVTKLHCDISDAVNILTHTADVNVPTWQSRIIKKLKKKYEVEDMRELYGQDIKGAGSRGRKRKKCRVGNVVDPKIPEKEDIRGRDSTLLGSQGKEEKLDAEACVQEFSEPNKNKLDLNVSEQEIFDSPRFPQFDLNSHDSGFLVPGADCELMDYDNAEEQRCSPPGDGSCKEISHNQPCSETKETNFVNGLNSSDESSSDIETDKRESVENDISGNVVHLETQYGSAVWDIFRRQDVPKLTEYLSKHFREFRHVTSLPVSYVIHPIHDQHLYLNEKHKKQLKLEYGVEPWTFEQYLGEAVFIPAGCPHQVRNRKSCIKVAMDFVSPENVQECVRLTEEFRLLPKNHRSKEDKLEIKKMALYAADVAIAEATELVGAK 1637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00845 1637 MobiDBLite consensus disorder prediction 373 396 - -
Tsu01g00845 1637 MobiDBLite consensus disorder prediction 373 418 - -
Tsu01g00845 1637 MobiDBLite consensus disorder prediction 713 735 - -
Tsu01g00845 1637 MobiDBLite consensus disorder prediction 719 735 - -
Tsu01g00845 1637 MobiDBLite consensus disorder prediction 1418 1468 - -
Tsu01g00845 1637 PANTHER ENBP1 PROTEIN 291 991 - -
Tsu01g00845 1637 PANTHER ENBP1 PROTEIN 994 1634 - -
Tsu01g00845 1637 MobiDBLite consensus disorder prediction 665 684 - -
Tsu01g00845 1637 Gene3D Cupin 1093 1333 - -
Tsu01g00845 1637 Gene3D Cupin 1435 1609 - -
Tsu01g00845 1637 ProSiteProfiles Zinc finger RING-type profile. 815 861 IPR001841 -
Tsu01g00845 1637 SMART AT_hook_2 441 453 IPR017956 GO:0003677
Tsu01g00845 1637 SMART AT_hook_2 409 421 IPR017956 GO:0003677
Tsu01g00845 1637 SMART AT_hook_2 680 692 IPR017956 GO:0003677
Tsu01g00845 1637 SMART AT_hook_2 656 668 IPR017956 GO:0003677
Tsu01g00845 1637 MobiDBLite consensus disorder prediction 1433 1457 - -
Tsu01g00845 1637 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 291 991 IPR045109 GO:0032454|GO:0033169
Tsu01g00845 1637 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 994 1634 IPR045109 GO:0032454|GO:0033169
Tsu01g00845 1637 Pfam JmjC domain, hydroxylase 1475 1583 IPR003347 -
Tsu01g00845 1637 SUPERFAMILY Clavaminate synthase-like 1103 1628 - -
Tsu01g00845 1637 ProSiteProfiles WRC domain profile. 7 52 IPR014977 -
Tsu01g00845 1637 MobiDBLite consensus disorder prediction 640 658 - -
Tsu01g00845 1637 SMART cupin_9 1204 1600 IPR003347 -
Tsu01g00845 1637 MobiDBLite consensus disorder prediction 45 66 - -
Tsu01g00845 1637 ProSiteProfiles JmjC domain profile. 1211 1600 IPR003347 -
Tsu01g00845 1637 Pfam Zinc-finger domain of monoamine-oxidase A repressor R1 811 874 IPR018866 -
Tsu01g00845 1637 MobiDBLite consensus disorder prediction 620 701 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g00845 Tsu-Chr1 7642703 7652245 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Tsu01g00845 JmjC 1.5e-17 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g00845 K15601 - lang:109335468 1169.07