LGRPv2

Show entries

Search:

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tsu01g00806	ATGGAGTCAAAGTGGAGCAACATTCTAACGCCGTCGTCAATTTTCTCTTCCAGCTTCGAAGATCTCAAATGGATCACAACAGAGTTCGATCATGAACTTTTCACCAAACGAGTCCAAACACCAAACGAATCAGCCATCGACAACGACGTCAAACCGTGTAAAGTGGATCCGTTCATCGGCGTCGGTGATGTTTGCTCCGGTAACATCGCCGGTGCCGCCGATTTGAGAAATCTGGATGCAGTAACTTCATTTTCAACATGTGGTGAACCAACAAATAATACTCTTGTATGCTCCAAAAACCTCACTCCCAAGCATTCCACCATCACTGCAACTATTGAATCTCAGTCATCCATTTCTGCTACCGTTACCAGCCCAGTATCAGCTAATAAACCAAGCAGTAGAGAAAATCAAGCCAAAGGAGTGACTACTACAAGTGGTTCCTCACGTGATCCatctgatgaagatgatgaagcaGGTCCTTGTGAACAAAGTACAAACCCTGTAGATATGAAGCGTCTTAGAAGGAAGGTTTCTAATCGCGAGTCTGCCAGAAGGTccagaagaagaaaacaagCACATTTGGCAGACCTCGAGGTTCAGGTTGAACAGTTGAGACTTGAAAATGCAAGCCTATTTAAGCAGCTTACAAATGCCAGCCAACAATTTCGTGATGCTAACACTAATAACAGGGTGCTAAAATCAGATGTTGAAGCTTTGAGAGCTAAGGTGAAGTTAGCTGAGGATATGGTCTCTAGGGGCACTTTACCAACTTTTAACAACCATCTTCTCCAAAATCAGAGCCAATTGAACACCACCCTACCACAAATCAACACTAGTAATCTCCGCTGCATGACGCATGTTTCGCCTACCATCACCGTCCATGGAAATGATGCTTCATATGGTGTTAGTGGACAGAATTCAGCAATTGGACTTGGAGACTTTGATATATCTTGCAGTGATTTCAACAATGGAGTCAATAGTGATGCTGTGAGCTCTTTGACTAGTATATGGCCATAA	1017	0.4199	MESKWSNILTPSSIFSSSFEDLKWITTEFDHELFTKRVQTPNESAIDNDVKPCKVDPFIGVGDVCSGNIAGAADLRNLDAVTSFSTCGEPTNNTLVCSKNLTPKHSTITATIESQSSISATVTSPVSANKPSSRENQAKGVTTTSGSSRDPSDEDDEAGPCEQSTNPVDMKRLRRKVSNRESARRSRRRKQAHLADLEVQVEQLRLENASLFKQLTNASQQFRDANTNNRVLKSDVEALRAKVKLAEDMVSRGTLPTFNNHLLQNQSQLNTTLPQINTSNLRCMTHVSPTITVHGNDASYGVSGQNSAIGLGDFDISCSDFNNGVNSDAVSSLTSIWP	338

Showing 1 to 1 of 1 entries

Show entries

Search:

Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Tsu01g00806	338	Gene3D	-	170	227	-	-
Tsu01g00806	338	CDD	bZIP_plant_GBF1	172	223	IPR045314	GO:0003700\|GO:0006355
Tsu01g00806	338	SMART	brlzneu	167	231	IPR004827	GO:0003700\|GO:0006355
Tsu01g00806	338	MobiDBLite	consensus disorder prediction	115	192	-	-
Tsu01g00806	338	ProSiteProfiles	Basic-leucine zipper (bZIP) domain profile.	169	232	IPR004827	GO:0003700\|GO:0006355
Tsu01g00806	338	Coils	Coil	180	249	-	-
Tsu01g00806	338	MobiDBLite	consensus disorder prediction	115	148	-	-
Tsu01g00806	338	PANTHER	BASIC LEUCINE ZIPPER 63	23	338	-	-
Tsu01g00806	338	SUPERFAMILY	Leucine zipper domain	171	221	IPR046347	GO:0003700\|GO:0006355
Tsu01g00806	338	Pfam	bZIP transcription factor	170	221	IPR004827	GO:0003700\|GO:0006355

Showing 1 to 10 of 12 entries

Show entries

Search:

Select	Gene	Chromosome	Start	End	Duplicated_type
	Tsu01g00806	Tsu-Chr1	7272230	7277556	Dispersed/Wgd

Showing 1 to 1 of 1 entries

Show entries

Search:

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Tsu01g00806	113	338	bZIP Transcription Factor Family	AT5G24800	49.573	1.34e-58	188

Showing 1 to 1 of 1 entries

Show entries

Search:

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	bZIP	Tsu01g00806		bZIP_1	9.7e-12	CL0018

Showing 1 to 1 of 1 entries

Show entries

Search:

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Tsu01g00806	K25784		-	gmx:778193	373.244

Showing 1 to 1 of 1 entries

Show entries

Search:

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Tsu07g00497	07	3879573	3883798	Tsu01g00806	01	7272230	7277556	PCT

Showing 1 to 1 of 1 entries