Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00806 ATGGAGTCAAAGTGGAGCAACATTCTAACGCCGTCGTCAATTTTCTCTTCCAGCTTCGAAGATCTCAAATGGATCACAACAGAGTTCGATCATGAACTTTTCACCAAACGAGTCCAAACACCAAACGAATCAGCCATCGACAACGACGTCAAACCGTGTAAAGTGGATCCGTTCATCGGCGTCGGTGATGTTTGCTCCGGTAACATCGCCGGTGCCGCCGATTTGAGAAATCTGGATGCAGTAACTTCATTTTCAACATGTGGTGAACCAACAAATAATACTCTTGTATGCTCCAAAAACCTCACTCCCAAGCATTCCACCATCACTGCAACTATTGAATCTCAGTCATCCATTTCTGCTACCGTTACCAGCCCAGTATCAGCTAATAAACCAAGCAGTAGAGAAAATCAAGCCAAAGGAGTGACTACTACAAGTGGTTCCTCACGTGATCCatctgatgaagatgatgaagcaGGTCCTTGTGAACAAAGTACAAACCCTGTAGATATGAAGCGTCTTAGAAGGAAGGTTTCTAATCGCGAGTCTGCCAGAAGGTccagaagaagaaaacaagCACATTTGGCAGACCTCGAGGTTCAGGTTGAACAGTTGAGACTTGAAAATGCAAGCCTATTTAAGCAGCTTACAAATGCCAGCCAACAATTTCGTGATGCTAACACTAATAACAGGGTGCTAAAATCAGATGTTGAAGCTTTGAGAGCTAAGGTGAAGTTAGCTGAGGATATGGTCTCTAGGGGCACTTTACCAACTTTTAACAACCATCTTCTCCAAAATCAGAGCCAATTGAACACCACCCTACCACAAATCAACACTAGTAATCTCCGCTGCATGACGCATGTTTCGCCTACCATCACCGTCCATGGAAATGATGCTTCATATGGTGTTAGTGGACAGAATTCAGCAATTGGACTTGGAGACTTTGATATATCTTGCAGTGATTTCAACAATGGAGTCAATAGTGATGCTGTGAGCTCTTTGACTAGTATATGGCCATAA 1017 0.4199 MESKWSNILTPSSIFSSSFEDLKWITTEFDHELFTKRVQTPNESAIDNDVKPCKVDPFIGVGDVCSGNIAGAADLRNLDAVTSFSTCGEPTNNTLVCSKNLTPKHSTITATIESQSSISATVTSPVSANKPSSRENQAKGVTTTSGSSRDPSDEDDEAGPCEQSTNPVDMKRLRRKVSNRESARRSRRRKQAHLADLEVQVEQLRLENASLFKQLTNASQQFRDANTNNRVLKSDVEALRAKVKLAEDMVSRGTLPTFNNHLLQNQSQLNTTLPQINTSNLRCMTHVSPTITVHGNDASYGVSGQNSAIGLGDFDISCSDFNNGVNSDAVSSLTSIWP 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00806 338 Gene3D - 170 227 - -
Tsu01g00806 338 CDD bZIP_plant_GBF1 172 223 IPR045314 GO:0003700|GO:0006355
Tsu01g00806 338 SMART brlzneu 167 231 IPR004827 GO:0003700|GO:0006355
Tsu01g00806 338 MobiDBLite consensus disorder prediction 115 192 - -
Tsu01g00806 338 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 169 232 IPR004827 GO:0003700|GO:0006355
Tsu01g00806 338 Coils Coil 180 249 - -
Tsu01g00806 338 MobiDBLite consensus disorder prediction 115 148 - -
Tsu01g00806 338 PANTHER BASIC LEUCINE ZIPPER 63 23 338 - -
Tsu01g00806 338 SUPERFAMILY Leucine zipper domain 171 221 IPR046347 GO:0003700|GO:0006355
Tsu01g00806 338 Pfam bZIP transcription factor 170 221 IPR004827 GO:0003700|GO:0006355
Tsu01g00806 338 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 174 189 IPR004827 GO:0003700|GO:0006355
Tsu01g00806 338 PANTHER BASIC LEUCINE ZIPPER 9 23 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g00806 Tsu-Chr1 7272230 7277556 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g00806 113 338 bZIP Transcription Factor Family AT5G24800 49.573 1.34e-58 188
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Tsu01g00806 bZIP_1 9.7e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g00806 K25784 - gmx:778193 373.244
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00497 07 3879573 3883798 Tsu01g00806 01 7272230 7277556 PCT