Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00797 ATGGCTCATAAAAGAGCATACTATTGCATATTCATACACTTTATTTTGTTGTCCATTTATTTTATGCCAACTTTTGGTGACACAAATGGTCAAATTTTGATAAGGTTCAAAAGTTTTTTGTCCAATAACAATGCTTTAGACAATTGGGTTGATGAGTCTAATTTGTGTAAATGGGCAGGTTTGGTATGCAAAAACACATTATTTTCTGGcttgaaattagaaaatatgGGACTAAGTGGAAAAATTGATGTAGACACATTATTGGAATTGCCAACTTTGGTTACTTTTAGTGTTAATAACAACTCATTTGAGGGTCCAATGCCTGAATTCAAAAAGCTTGTGAAGTTAAGAGGGTTATTtttgtctaataataaattttcagGTGAAATTTTAGATGATAGTTTTGAAGGTATGGGAAAtcttaaatttgtatttttggcTGAAAATGAGTTCAATGGTCATATTCCTATTTCACTTGCTAAATTGCCTAATCTTTTGGATTTGGACTTGCATGGGAATAGTTTTGGAGGTAACATACCTGAATTTCAAACAAATGGTTTTAGAGCATTTAATTTGTCTAGTAACCAATTGGAGGGTCCAATACCACAAAGCTTAAGCAATGAGCCTTCATTATCAAACACAAAAAGCAATGACCCTTCAACCTCATTTTCTGGCAACAAAGCCTTATGTGGGAAACCTTTGAGCAATCCATGCAACACACCTCCAACCAAATCTATTGTGAATCCTAATTCAGCTACTTCAACTCAAGGAAAgggaaaaaagcaaaaaaaattacttgtaGTGTTGATTGTAGTGTTAGCTACGATTATTTTAGCTTCAATGTTTGCACTTTTGTTTATCCAAAGCCGCCGTCGGCGACAACGAAGTTTAGAACAAAGCCAACCCATATTAGGCCTACAATTGAATTCTCAAAAGACTACTCCAAGTGTCATAGAGACAAAGTCCATTGATTTGGCTGGTGATTTTAGTAAAGGTGAAAATGGAGAATTGAATTTTGTTAGGGAAGACAAAGGTGGCTTTGATTTGAATGATTTGCTTAGGTCCTCAGCTGAAGTGCTTGGAAGTGGAAGTTTTGGATCAACTTATAAGGCTATAGTTTTGAATGGACCAATTGTGGTTGTGAAGAGATTTAGACACATGAACAATGTTGGGAAACAAGAGTTTTTTGAACACATGAAAAAGCTTGGAAGTTTGAATCATCCTAATCTACTCCCTCTTGTTGCATTCTACtacaaaaaagaagagaagtttttggtttatgatttTGGTGAAAATGGTAGCTTGGCTAGTCATCTACATGGTAGAAATGGCATTGTACTAAATTGGTCAACTCGTCTAAAAATCATAAAAGGAGTAGCAAGAGGCTTAGCACATCTCTACAAAGAGTTTCCTAACCAAAACCTACCACATGGTCATCTAAAATCTTCCAATGTAATGCTAAACAATTCATTTGAGCCATTTTTAACAGAGTATGGACTTATACCTATTACAAACAAAAACCATGCACAACAATTCATGGCATCCTATAAATCACCAGAAGTCACACACTTTGATAGACCAAATGAAAAAACAGACATTTGGTGTCTTGGAATCCTTATTTTAGAACTTTTAACAGGAAAATTTCCAGCAAATTATTTGAGACATGGAAAAGGCGAAAATTCGGATTTAGCAACATGGGTTAATTCAGTTGTTAGAGAAGAATGGACAGGTGAAGTGTTTGATAAAGATATAATGGGAACAAGAAATGGTGAAGGTGAGATGTTGAAGCTTTTGAGGATAGGAATGTATTGTTGTGAATGGAGTGTTGAGAGAAGATTGGATTGGAGAGAAGCTTTGGCTAAGATTGAAGAACTTAAAGAAAAAGATAGTGAAGATGAATCTTTTTCTTATGTTAGTGATGCTGATTTGTATTCAAGAGGTGTCACTGATGAggaattttctttttctgttacTGATCATTCACAGGTTGATAAGTTTGAGAATGTGGCAATGTAG 2016 0.3299 MAHKRAYYCIFIHFILLSIYFMPTFGDTNGQILIRFKSFLSNNNALDNWVDESNLCKWAGLVCKNTLFSGLKLENMGLSGKIDVDTLLELPTLVTFSVNNNSFEGPMPEFKKLVKLRGLFLSNNKFSGEILDDSFEGMGNLKFVFLAENEFNGHIPISLAKLPNLLDLDLHGNSFGGNIPEFQTNGFRAFNLSSNQLEGPIPQSLSNEPSLSNTKSNDPSTSFSGNKALCGKPLSNPCNTPPTKSIVNPNSATSTQGKGKKQKKLLVVLIVVLATIILASMFALLFIQSRRRRQRSLEQSQPILGLQLNSQKTTPSVIETKSIDLAGDFSKGENGELNFVREDKGGFDLNDLLRSSAEVLGSGSFGSTYKAIVLNGPIVVVKRFRHMNNVGKQEFFEHMKKLGSLNHPNLLPLVAFYYKKEEKFLVYDFGENGSLASHLHGRNGIVLNWSTRLKIIKGVARGLAHLYKEFPNQNLPHGHLKSSNVMLNNSFEPFLTEYGLIPITNKNHAQQFMASYKSPEVTHFDRPNEKTDIWCLGILILELLTGKFPANYLRHGKGENSDLATWVNSVVREEWTGEVFDKDIMGTRNGEGEMLKLLRIGMYCCEWSVERRLDWREALAKIEELKEKDSEDESFSYVSDADLYSRGVTDEEFSFSVTDHSQVDKFENVAM 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00797 671 Gene3D Ribonuclease Inhibitor 26 244 IPR032675 -
Tsu01g00797 671 Gene3D Phosphorylase Kinase; domain 1 330 429 - -
Tsu01g00797 671 SUPERFAMILY L domain-like 47 231 - -
Tsu01g00797 671 Pfam Leucine rich repeat N-terminal domain 30 63 IPR013210 -
Tsu01g00797 671 MobiDBLite consensus disorder prediction 201 226 - -
Tsu01g00797 671 Gene3D Transferase(Phosphotransferase) domain 1 431 646 - -
Tsu01g00797 671 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 14 635 - -
Tsu01g00797 671 PANTHER LRR RECEPTOR-LIKE KINASE 14 635 - -
Tsu01g00797 671 Pfam Protein kinase domain 357 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu01g00797 671 ProSiteProfiles Protein kinase domain profile. 354 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu01g00797 671 ProSitePatterns Protein kinases ATP-binding region signature. 360 382 IPR017441 GO:0005524
Tsu01g00797 671 SUPERFAMILY Protein kinase-like (PK-like) 357 626 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g00797 Tsu-Chr1 7187550 7190638 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g00797 2 656 Receptor kinase-like Gene Family AT5G35390 45.152 0.0 551
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Tsu01g00797 Pkinase 7e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g00797 - - gmx:100781593 870.537