Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tsu01g00790 | ATGGCTGTGGAACTCATGGGGTTCCCAAAACTAGATGAACAAAAAGCCATACAAGAGGCTGCATCAGAAGGTCTTAAAGGTATGGAACACTTGATCCTAACCCTTTCGAATCAACCAACTCAATTAAACACACAATTAACTGATCACACCGTTTCTAAGTTCAAAAAACTCATTTCTTTACTTAACCGAACCGGTCATGCCCGGTTTAGACGCGCCCCGGTTCAAACCTCTTCATCACCACCGGTTCAAATCTTTTCATCACCGGTTCAACTTCAACCTTCTCTCCCTCCACCACAACCGAAACAGTTTCATTCTCCGCCACCGGCACTATCTCCGACGCCGATTTCAATACGTCACGCGCCGGCTACTTTTGTTCAACCTCAACCGCAATCACTATCACAATCACATAGTCTCACGCTTGATTTCACGAAACCGAACGACGTCGTTTTGAGTTCAAACGCGAAAAATAACTCTATGGTGGAACTTGAATTCTCGAAGGATACAGCGACGTTTAGTGTTTCTTCAACTTCGTCGTTTATGTCATCTGCTATTACCGGTGATGGTAGCGTTAACGGTAAGCAAGGATCGTCGATTTTTCTTACTCCGGCGGCAACACCAGCTATCTCCGGTGGAAAACCACCGCTTTTGTCTGGACCGTCTAAGAAACGGTGTCATGATCATGGTGAACACTCCGAGGACGTTTCAGGATCAAATAAGTGTCACTGTGTTAAGAGAAGaaaaaatagGGTGAAGAGAACTGTGAGAGTACCGGCAATAAGTTCAAAAACCGCCGATATACCAGCCGATGAATACTCGTGGAGAAAATACGGTCAAAAACCAATCAAAGGATCACCATATCCACGTGGCTATTACAAGTGTAGCACAGTGAGAGGGTGCCCAGCAAGGAAACACGTGGAACGTGCACCAGATGATCCAACGATGCTGATTGTAACATATGAAGGGGAACACAGACACGCAATTCAAGCCGCGATGCAGGAGAATGCAGCCGGGATTGTGGGTTTGGTATTTGAGTCAACGTAA | 1041 | 0.4563 | MAVELMGFPKLDEQKAIQEAASEGLKGMEHLILTLSNQPTQLNTQLTDHTVSKFKKLISLLNRTGHARFRRAPVQTSSSPPVQIFSSPVQLQPSLPPPQPKQFHSPPPALSPTPISIRHAPATFVQPQPQSLSQSHSLTLDFTKPNDVVLSSNAKNNSMVELEFSKDTATFSVSSTSSFMSSAITGDGSVNGKQGSSIFLTPAATPAISGGKPPLLSGPSKKRCHDHGEHSEDVSGSNKCHCVKRRKNRVKRTVRVPAISSKTADIPADEYSWRKYGQKPIKGSPYPRGYYKCSTVRGCPARKHVERAPDDPTMLIVTYEGEHRHAIQAAMQENAAGIVGLVFEST | 346 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tsu01g00790 | 346 | SMART | WRKY_cls | 267 | 327 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Tsu01g00790 | 346 | MobiDBLite | consensus disorder prediction | 91 | 114 | - | - | |
Tsu01g00790 | 346 | MobiDBLite | consensus disorder prediction | 69 | 115 | - | - | |
Tsu01g00790 | 346 | MobiDBLite | consensus disorder prediction | 209 | 237 | - | - | |
Tsu01g00790 | 346 | PANTHER | WRKY TRANSCRIPTION FACTOR 21-RELATED | 12 | 344 | IPR044810 | GO:0003700 | |
Tsu01g00790 | 346 | PANTHER | WRKY PROTEIN | 12 | 344 | - | - | |
Tsu01g00790 | 346 | Pfam | Plant zinc cluster domain | 221 | 265 | IPR018872 | - | |
Tsu01g00790 | 346 | MobiDBLite | consensus disorder prediction | 71 | 90 | - | - | |
Tsu01g00790 | 346 | ProSiteProfiles | WRKY domain profile. | 262 | 328 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Tsu01g00790 | 346 | MobiDBLite | consensus disorder prediction | 219 | 237 | - | - | |
Tsu01g00790 | 346 | Pfam | WRKY DNA -binding domain | 269 | 325 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Tsu01g00790 | 346 | Gene3D | WRKY domain | 250 | 327 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Tsu01g00790 | 346 | SUPERFAMILY | WRKY DNA-binding domain | 263 | 327 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tsu01g00790 | Tsu-Chr1 | 7078092 | 7081264 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tsu01g00790 | 1 | 345 | WRKY Transcription Factor Family | AT2G24570 | 55.618 | 5.38e-113 | 329 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Tsu01g00790 | WRKY | 8.1e-26 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tsu01g00790 | - | - | cam:101509842 | 500.745 |