Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00789 ATGGCTGGTTCTAGTTCCTGTTCTGTTTCTGGTTCTGGTTCTGTTAGTTGTAAAAGTGATAGTGGAATTGAGAATTTGATTTGTGCTAGTAAATCATTGAAACTTAGCTTAGAGAAATCAAAGAGTGTTGGATTAGCATTAGAGAAAGCAGGGCCAAGATTAGATGAGATTAGGGTAAGGTTACCTTGGCTTGAATCCGCGGTTAGGCCGATTCGAGCTGAGAAGGATGCTCTTGTAGCGGTTGGAGGTCATATTAATAGGGCTGTTGGTCCTGCGGCTGCTGTGTTGAAGGTTTTCGATGCGGTTCATGGGCTTGAGAAGTCTTTGTTGTCGGATCCACGGATTGATTTACCGGGTTATTTGTCGGTTTTGAAGCGTCTTGAGGAGGCGTTAAGGTTTTTGGGAGATAATTGTGGGTTGGCTATTCAGTGGTTAGATGATATAGTTGAGTATTTAGAAGATAATTCGGTTGCTGATCAGGTTTATCTTAAGAATTTGAAGAAGGAGTTGGAGAATCTTAAGGGATCACAGAATGGTGATTTGGATGGTGGTTTGTTAGATGCTGCTTTGGATAAATTAGAGAATGAGTTTAGGTTGCTTTTAACTGATAACAGTGTGCCGCTTCCTATGTCGTCGGATTCTCTTGGTGATCAGCCTTGCATTGCGCCTTCACCTTTGCCTGTTTCTGTTGTTCACAAATTGCAGGCTATTCTCGGTAGGTTGAGAGCTAATGATAGACTTGATAAATGTGTGTCGATTTACGTTGAAGTTAGAAGTTCTAATGTGAGGGCGAGTTTGCAGGCGCTGAATTTGGATTACCTTGAGATCTCGGTGTCTGAGTTTAATGATGTGCAGAGTATAGAGGTGTATATAGCTCAATGGGGAAAGCATTTGGAGTTTGCGGTGAAGCATTTGTTTGAGGCTGAGTATAAGCTTTGTAATGATGTGTTTGAGAGGCTTGGACTCGATGTGTGGATGGGTTGCTTTTCAAAGATAGCTGCGCAGGCTGGTATACTTGCATTTCTTCAGTTTGGTAAGACTGTTACGGAGAGTAAGAAAGATCCCATTAAGCTTTTGAAGTTGTTGGATATTTTTGCATCGTTGAACAAATTGAGATTGGACTTTAACCGTCTTTTTGGGGGTGATGCGTGCGTTGAAATCCAAAATCTGACTAGGGAACTTATCAAGAGTGTGATTGATGGTGCAGCGGAAATATTCTGGGAACTTTTGGTTCAGGTAGAGTTACAAAGGCAGAACCCTCCTCCTCCAGATGGCAATGTCCCGAGATTGGTGAGCTTTATCACTGATTACTGCAATAAACTCTTGGGGGACGACTATAAGCCTATACTGACTCAAGTATTGATCATTCACCGAAGTTGGAAGCGTCAAAGCTTTCAGGAGAAGCTCCTTGTTAATGAGATTGTGAACATATTGAAAGCTGTTGAATCAAATTTGGAGACGTGGATCAAGGCATATGATGATCCTATGTTGTCAAACTTTTTTGCCATGAACAGTCATTGGCATCTGTTCAAGCATTTGAAAGGGACAAAACTTGGAGATCTTTTAGGAGATTCTTGGTTAAAGGAACATGAACAGTATAAGGACTATTACTCCACATATTTCTTGCGAGACAGCTGGGGTAAGCTTCCTGGACATTTGAGTAGGGAAGGGTTGATTCTTTTCTCGGGAGGGCGTGCAACTGCTCGTGATCTGGtcaagaaaagattgaaaaagtTCAACGAAGTTTTTGATGATATGTATTCAAAGCAGTCGGGTTGGATCATGGTCGAGCGAGATCTAAGAGAGAAGACATGTCAGCTTATAGTGCAGGCTGTGGTGCCTGTTTACCGGAGTTACATGCAGAATTACGGTCCCTTGGTCGAGCAAGATGCCAGCTCTAATAAATATGCAAAATACACAGTACAGAAGCTCGAAGAAATGCTTTTGTGTCTTTATCGGCCGAAGCCTGCAAGACACGGCAGCTTGAAAAGTCCGCAGCTTAGTGGAAAGTACGGCAATGGAATACCTGATCTTCGTCGAACGGCTTCTGCAGTCGTGTAG 2061 0.4231 MAGSSSCSVSGSGSVSCKSDSGIENLICASKSLKLSLEKSKSVGLALEKAGPRLDEIRVRLPWLESAVRPIRAEKDALVAVGGHINRAVGPAAAVLKVFDAVHGLEKSLLSDPRIDLPGYLSVLKRLEEALRFLGDNCGLAIQWLDDIVEYLEDNSVADQVYLKNLKKELENLKGSQNGDLDGGLLDAALDKLENEFRLLLTDNSVPLPMSSDSLGDQPCIAPSPLPVSVVHKLQAILGRLRANDRLDKCVSIYVEVRSSNVRASLQALNLDYLEISVSEFNDVQSIEVYIAQWGKHLEFAVKHLFEAEYKLCNDVFERLGLDVWMGCFSKIAAQAGILAFLQFGKTVTESKKDPIKLLKLLDIFASLNKLRLDFNRLFGGDACVEIQNLTRELIKSVIDGAAEIFWELLVQVELQRQNPPPPDGNVPRLVSFITDYCNKLLGDDYKPILTQVLIIHRSWKRQSFQEKLLVNEIVNILKAVESNLETWIKAYDDPMLSNFFAMNSHWHLFKHLKGTKLGDLLGDSWLKEHEQYKDYYSTYFLRDSWGKLPGHLSREGLILFSGGRATARDLVKKRLKKFNEVFDDMYSKQSGWIMVERDLREKTCQLIVQAVVPVYRSYMQNYGPLVEQDASSNKYAKYTVQKLEEMLLCLYRPKPARHGSLKSPQLSGKYGNGIPDLRRTASAVV 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00789 686 Pfam Exo70 exocyst complex subunit 293 648 IPR046364 GO:0000145|GO:0005546|GO:0006887
Tsu01g00789 686 PANTHER EXOCYST COMPLEX PROTEIN EXO70 21 675 IPR004140 GO:0000145|GO:0006887
Tsu01g00789 686 SUPERFAMILY Cullin repeat-like 95 652 IPR016159 -
Tsu01g00789 686 Gene3D Exocyst complex component Exo70 93 659 - -
Tsu01g00789 686 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 21 675 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g00789 Tsu-Chr1 7065564 7068504 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g00789 16 686 EXO70 exocyst subunit family AT4G31540 74.123 0.0 1037
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g00789 K07195 - gmx:100796139 1158.28