Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tsu01g00785 | ATGATGGATGAAAATCCTAGTAAAAAAGGCACTGATGGGATGGTAGCCCCTAGAAAAAGGATAAGCGTTGTGTTTAGAGACACTGCTAATACCAGAAATCGAAATGATCAAATTTGCAGCCGAGTGGGTTGCAGTAGTACAGCCAACCCTCCTAAGGTTGCTCAAGTCAAATCTTCCGAAAAAGTTAAATCTTCAAGGCCATCAATGCAGTCAACTTCAAGTGGCAAGGAGGTAATTGGTAGTTCCCGTAGAACAGCTACTAACCCAGCTAAACCGCTTACAAAGCCTCGGAGAACATTAACATCAAGTGCGCTTCAAGCTGATGAGGAAGGTAAAAAGTCTACTAATGTAACTTTGACAGAAGTAAGAAAATCTAGCGGGGTATCAAATTTACCATCTCAAAGGAATTTTAATCAAAGACCTGGATTTCGTCAACAAGAAAATGAAAGCAAGGGTCCGGTGAAACAAGCTGTTTCTAGCAGCAAGTATGGATTGAGGAACCTCAGATGCAATACTATATCTGATATCATCCCTTCTTCTTGCTCATCGTCATCATCAGATTCTACTCTTAATAGAAAGAAGGCTGTGATAAAAAAGAGAAACACTGGAGAGGAAAGTAGCTTAACTGTGAAAGGGAAGAAGATGACCGGGTCGTCATTGGAAAGATTGAATTCTGGCTCCAGAAATGGAATATCTATATCTGAAGCAAGAGGACCTAGAAATATTCCTCCTCGTAAAGACAACAGCAGAGCAACAGTTAGACCTGAAAGATCGGTTAGTCGTTATGCCAGGGGAAGATTGTCTAGCCAAGGAAATGAAAACCCCACGGAAACCAATGAGCCCCATGTTGAGTTACCTAGTTCGCCTCATTGTATTGATCTTAATTCTCCTGTCATTGAAGAGTTATCTGATACTATGCCTATGTCTCCTGAAGAATATGACATATCTCATTCTGTAATAAATCGGAATGGATTACGGCGTTACGATATGGACATTATTTCCGAGGTATTATTGGCACTAGAGAGAATTGAGCAAAATGAAGAGTTAACCCATGAGCAAATTCGTTTACTAGAGACCAACTCGTTACTTAACGGGCTTGGCTTATATGATCGTCATAGAGACATGCGACTGGATATTGATGACATGTCATACGAGGAACTCTTAGATCTTGAAGAGAGAATGGGTACCGTGAGCACAGCTCTAACAGAGGAAGCACTCTCAGATAGTCTTAGAAGAAGTATCTATCAGTCTGCGCCTTCCGATGATGCATCCAACTGTGTTAATGAGGATAAGGGTAATATCAAATGCTGCATTTGCCAGGTATTTTTTAACAGTTATTGA | 1341 | 0.4072 | MMDENPSKKGTDGMVAPRKRISVVFRDTANTRNRNDQICSRVGCSSTANPPKVAQVKSSEKVKSSRPSMQSTSSGKEVIGSSRRTATNPAKPLTKPRRTLTSSALQADEEGKKSTNVTLTEVRKSSGVSNLPSQRNFNQRPGFRQQENESKGPVKQAVSSSKYGLRNLRCNTISDIIPSSCSSSSSDSTLNRKKAVIKKRNTGEESSLTVKGKKMTGSSLERLNSGSRNGISISEARGPRNIPPRKDNSRATVRPERSVSRYARGRLSSQGNENPTETNEPHVELPSSPHCIDLNSPVIEELSDTMPMSPEEYDISHSVINRNGLRRYDMDIISEVLLALERIEQNEELTHEQIRLLETNSLLNGLGLYDRHRDMRLDIDDMSYEELLDLEERMGTVSTALTEEALSDSLRRSIYQSAPSDDASNCVNEDKGNIKCCICQVFFNSY | 446 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tsu01g00785 | 446 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE RNF165 | 101 | 443 | IPR045191 | GO:0061630 | |
Tsu01g00785 | 446 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE RNF165 | 2 | 94 | IPR045191 | GO:0061630 | |
Tsu01g00785 | 446 | MobiDBLite | consensus disorder prediction | 176 | 289 | - | - | |
Tsu01g00785 | 446 | MobiDBLite | consensus disorder prediction | 41 | 161 | - | - | |
Tsu01g00785 | 446 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE ATL44-RELATED | 101 | 443 | - | - | |
Tsu01g00785 | 446 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
Tsu01g00785 | 446 | MobiDBLite | consensus disorder prediction | 176 | 191 | - | - | |
Tsu01g00785 | 446 | MobiDBLite | consensus disorder prediction | 208 | 234 | - | - | |
Tsu01g00785 | 446 | MobiDBLite | consensus disorder prediction | 192 | 207 | - | - | |
Tsu01g00785 | 446 | MobiDBLite | consensus disorder prediction | 240 | 261 | - | - | |
Tsu01g00785 | 446 | Coils | Coil | 340 | 360 | - | - | |
Tsu01g00785 | 446 | MobiDBLite | consensus disorder prediction | 263 | 283 | - | - | |
Tsu01g00785 | 446 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE ATL44-RELATED | 2 | 94 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tsu01g00785 | Tsu-Chr1 | 7029254 | 7033264 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tsu01g00785 | 332 | 440 | C3H Transcription Factor Family | AT2G15530 | 40.000 | 6.32e-16 | 78.6 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tsu01g00785 | - | - | mtr:MTR_1g009680 | 563.148 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Tsu01g00785 | 01 | 7029254 | 7033264 | Tsu07g00544 | 07 | 4242892 | 4246724 | PCT |