Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00732 ATGGAGCGACCCAGGAGCTTCAACGACGGTCAACATATTATAGAAATAGGTGGGAATATCGAGGCTTCTACATCCGCATCGTCTCGTGATAGACATTTTGATGATGTAGACACGGTGCGTGTAGAAAGAATCGGTGGTGTGCAGTTGTCTGGTGGTCAGCCTTCGGTTTCAACCTCAGGCGTATCAATTGGATCAAATAGTAGGAATTCTTCGTTTGTAAGACGGGGGGATGCTCGTCGGAGTAGGAGTCCTGTTCATTCTGGATTATGGATATCTATTGAGCTAGTCCTGTTAGTAAGCCAGATTGTTGCGTCTGTCGTTGTTTTGTCATTGTCAAGGCATGAGCATCCGCGGACGCCATTGTTTCAATGGATAGTGGGCTATGCTTCTGGATGTGTTGCTAcacttcctcttcttttttggCGGTATTATAATCATAACCATATGCGAGAACAAGATACAACTCAGTCACGTCAAACATCTCCTCGGGTTAGTGATCCTTCTGGGACACATCTGTCCATTTCAAGAAATAATGGAGGAGATGTTGGTCAGGCTGCTGCTGCATCTTCTAGAGGAACTCAAGCTTCAATATTGATGAATAGAAGAACGAAGATACTTGTGGAGTACTTCAAAATATCCTTAGATTGCTTTTTTGCTGTGTGGTTTGTTGTTGGAAATGTATGGATCTTTGGGGGACATTCTTCTGCCGATGAAGCTCCTAACTTGTATAGGTATACCCTGTCATATACTCTTACATTTATTCTTCTAGGTTTCCTGGGTTTGCAAATTACATCCTTTTCCCTTTGCTTGGCAGGTTATGTATCGTGTTTCTTGCATTTAGCTGCATTGGTTATGCTATGCCTTTCATTCTCTGTTCAACCATCTGCTGTTGTCTACCATGTATAA 906 0.4194 MERPRSFNDGQHIIEIGGNIEASTSASSRDRHFDDVDTVRVERIGGVQLSGGQPSVSTSGVSIGSNSRNSSFVRRGDARRSRSPVHSGLWISIELVLLVSQIVASVVVLSLSRHEHPRTPLFQWIVGYASGCVATLPLLFWRYYNHNHMREQDTTQSRQTSPRVSDPSGTHLSISRNNGGDVGQAAAASSRGTQASILMNRRTKILVEYFKISLDCFFAVWFVVGNVWIFGGHSSADEAPNLYRYTLSYTLTFILLGFLGLQITSFSLCLAGYVSCFLHLAALVMLCLSFSVQPSAVVYHV 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00732 301 MobiDBLite consensus disorder prediction 154 187 - -
Tsu01g00732 301 MobiDBLite consensus disorder prediction 151 187 - -
Tsu01g00732 301 PANTHER C3H4 TYPE ZINC FINGER PROTEIN 1 269 - -
Tsu01g00732 301 MobiDBLite consensus disorder prediction 49 75 - -
Tsu01g00732 301 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 1 269 - -
Tsu01g00732 301 MobiDBLite consensus disorder prediction 50 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g00732 Tsu-Chr1 6528577 6532345 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g00732 74 271 C3H Transcription Factor Family AT1G80400 45.813 4.00e-59 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g00732 - - gmx:100778728 372.859