Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00712 atgtCAAGCTCTGCAATCATTGCGGCGCATTCTAGCTCTTGGGCTGCAGCACTCGTTAGGATCTCTCCTTACACCTTTTCTGCAATCGGAATCGCCGTCTCAATCGGTGTCTCCGTTCTCGGTGCTGCTTGGGGAATTTACATCACCGGTAGTAGCTTGATCGGTGCTGCAATTAAGGCTCCCAGAATCACTTCCAAAAATCTCATTAGTGTAATCTTCTGTGAAGCTGTTGCTATATATGGTGTTATTGTGGCTATTATCCTGCAGACAAAATTAGAAAGCGTTCCAAAAGCAAGTATCTATGAACCAGAATCTCTTAGAGCTGGATATGCAATCTTTGCTTCTGGACTTATCGTGGGCTTCGCAAATCTTGTTTGTGGGTTGTGCGTAGGAATAATTGGAAGCAGCTGCGCATTGTCTGATGCTCAGAACTCCTCTCTCTTTGTGAAAATTCTTGTGATTGAGATCTTCGGCAGTGCGCTTGGTCTATTTGGTGTTATTGTTGGAATTATTATGTCAGCTCAAGCAACATGGCCGACAAAATTTTAG 549 0.4372 MSSSAIIAAHSSSWAAALVRISPYTFSAIGIAVSIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKNLISVIFCEAVAIYGVIVAIILQTKLESVPKASIYEPESLRAGYAIFASGLIVGFANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPTKF 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00712 182 Gene3D - 24 179 IPR035921 -
Tsu01g00712 182 PRINTS Vacuolar ATP synthase 16kDa subunit signature 42 66 IPR000245 GO:0033179|GO:0046961|GO:1902600
Tsu01g00712 182 PRINTS Vacuolar ATP synthase 16kDa subunit signature 151 174 IPR000245 GO:0033179|GO:0046961|GO:1902600
Tsu01g00712 182 PRINTS Vacuolar ATP synthase 16kDa subunit signature 124 150 IPR000245 GO:0033179|GO:0046961|GO:1902600
Tsu01g00712 182 PRINTS Vacuolar ATP synthase 16kDa subunit signature 68 92 IPR000245 GO:0033179|GO:0046961|GO:1902600
Tsu01g00712 182 PANTHER V-TYPE PROTON ATPASE 21 KDA PROTEOLIPID SUBUNIT 7 180 - -
Tsu01g00712 182 SUPERFAMILY F1F0 ATP synthase subunit C 22 91 IPR035921 -
Tsu01g00712 182 Pfam ATP synthase subunit C 113 172 IPR002379 GO:0015078|GO:0033177|GO:1902600
Tsu01g00712 182 Pfam ATP synthase subunit C 29 88 IPR002379 GO:0015078|GO:0033177|GO:1902600
Tsu01g00712 182 CDD ATP-synt_Vo_c_ATP6F_rpt2 108 172 - -
Tsu01g00712 182 PANTHER V-TYPE PROTON ATPASE PROTEOLIPID SUBUNIT 7 180 - -
Tsu01g00712 182 SUPERFAMILY F1F0 ATP synthase subunit C 105 173 IPR035921 -
Tsu01g00712 182 CDD ATP-synt_Vo_c_ATP6F_rpt1 26 88 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g00712 7 181 Primary Pumps ATPases(2) AT2G25610 92.000 1.50e-111 315
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g00712 K03661 - gmx:100527177 310.071