Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00707 ATGGGTCGACCATTTAGTGGAATAACTACAGATTTCAACGGAAGACTTGAAGTTTATAAACAAGATTGGATTTGTGCAATCTCTACTGGCCTTAGAATATTTGCTCCAACTTTCTACATATTCTTTGCTTCTGCACTTCCTGTTATTGCTTTTGGAGAGCAACTTAATAGAGATACAGATGGAGCCTTAAGCACAGTTGAAACATTGACATCTACGGCTATGTGTGGAATTATCCATTCAATATTTGGTGGTCAACCCTTGTTGATTTTAGGAGTTGCTGAACCAACTGTTATCATGTATACCATTCTATACGGTTTTTGCCTAAAAAGACCAGACTTAGGTTCCAAGCTGTTTTTGGCTTGGGCTGGTTGGGTTTGTGTTTGGACATCATTCTTGTTGATTCTGCTTGCGGTTTTCAATGCGTGTACAATTATCAGTAGATTTACTAGGCTTGCGGAGGAATTATTTGGCACGCTAATTACTGTGCTTTTCTTTCAAGAGGCTATAGAGGGACTCATAAGTGAGTTCAAGATACCAAAGGATGCAGATCCCTCGTTAGAGGAATATCAATTCCATTGGCGGTATACAAATGGATTACTTtcaatcattttcttttttgggttaCTTTTCACTGCCATTCTAAGTAGAAGAGCAAGAAAATGGCGATATGGAACAGGGTGGATACGAGGTATCGTTGCAGATTATGGAGTTCCACTGATGGTAGTGTTTTGGACTGCACTATCTTATACCGTACCTAAGAAAGTTCCATCTGATGTTCCTAGAAGATTGTTTTGTCCACTGCTTTGGGAACCTGCATCTCTCTACCACTGGACAGTAGTTAAGGATATGGGAAAGGTACCATTACCATATATCTTTGGGGCAATTATTCCAGCAGTGATGATAGCAGGTTTATACTTTTTTGATCATAGTGTAGCTTCAAAGTTGGCTCAACAGAAGGACTTTAACCTTCAAAAACCATCTGCTTACCACTatgatatttttcttcttgGAATAATGACTTTTATTTGCGGTATTCTTGGTCTTCCTCCGGCAAATGGAGTACTTCCTCAATCCCCTATGCATACAAAGAGTTTAGCAATTCTTAGGAGGCAGATGATCCGAAAGAAGGTGGTAAAGAGTGCCAAGGAATGCATTAGACAACAAGGAAGCAACTCTGAATTATACGGAACGATGCGAGCTGTGTTTATAGAAATGGATGCCGCACCTACCGTTAAAGAGTTGGAGTCTCTGAAGGAAGCTgtaatgaataataataatgaaaagagTGGTACAAAGGAAAAATTTGATCCGATTAAACATATCGATGCATATTTGCCTGTTAGAGTTAATGAGCAAAGAATGAGCAACTTATTGCAATCTATACTTGTTGCTCTATCACTTTTAGCTATTTCTATCATCAAAAAGATACCTAGCTCAGTTCTTTGGGGATATTTTGCTTATATGGCAATTGATAGTCTTCATGGGAATCAATTCTATGAAAGGTTATTGCTTCTCTTCATCCCCCCAAAAAGGCTCTACAAAATTTTGGAAGGCTCACATGCCTCATTTTTCGAGTCAGTACCATACCAGATAATAGCTGCATTTACAAGTTTACAGTTTCTATATTTCGCAGTCTGCTATGGTTTGACATGGATACCTATCGGTGGAATATTGTTTCCCTTACCTTTCTTCCTTCTCATATCTATAAGAGAGAAATTGCTTCCAAGATTATTCAAACCAAACCATCTTCAGGAATTAGATGCTTCTGAGTATGAGGAAATTATTGGTGCTCCACTTGGACCCTATAATATACCACTACTCGAAAAAGATGCACAAACTAGTTCTGACAATACAGATACCTCAGAAGAAGATTATTATGATGCCGAAATACTGGATGAGATGACAACTTTTAGGGGAGAATTGAAATTTAGAACAGTAAACCAAAATGATAGTAGCAGAAGCTTCAACCGTAGCTTCACTTATGGCTTCAATGAAGACAGACACGTTCAGGGACAGATTTACCCTGAATAA 2031 0.3757 MGRPFSGITTDFNGRLEVYKQDWICAISTGLRIFAPTFYIFFASALPVIAFGEQLNRDTDGALSTVETLTSTAMCGIIHSIFGGQPLLILGVAEPTVIMYTILYGFCLKRPDLGSKLFLAWAGWVCVWTSFLLILLAVFNACTIISRFTRLAEELFGTLITVLFFQEAIEGLISEFKIPKDADPSLEEYQFHWRYTNGLLSIIFFFGLLFTAILSRRARKWRYGTGWIRGIVADYGVPLMVVFWTALSYTVPKKVPSDVPRRLFCPLLWEPASLYHWTVVKDMGKVPLPYIFGAIIPAVMIAGLYFFDHSVASKLAQQKDFNLQKPSAYHYDIFLLGIMTFICGILGLPPANGVLPQSPMHTKSLAILRRQMIRKKVVKSAKECIRQQGSNSELYGTMRAVFIEMDAAPTVKELESLKEAVMNNNNEKSGTKEKFDPIKHIDAYLPVRVNEQRMSNLLQSILVALSLLAISIIKKIPSSVLWGYFAYMAIDSLHGNQFYERLLLLFIPPKRLYKILEGSHASFFESVPYQIIAAFTSLQFLYFAVCYGLTWIPIGGILFPLPFFLLISIREKLLPRLFKPNHLQELDASEYEEIIGAPLGPYNIPLLEKDAQTSSDNTDTSEEDYYDAEILDEMTTFRGELKFRTVNQNDSSRSFNRSFTYGFNEDRHVQGQIYPE 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00707 676 Gene3D Helical hairpin bin 15 57 - -
Tsu01g00707 676 PANTHER BORON TRANSPORTER 6-RELATED 3 652 - -
Tsu01g00707 676 PANTHER ANION EXCHANGE PROTEIN 3 652 IPR003020 GO:0005452|GO:0006820|GO:0016020
Tsu01g00707 676 Coils Coil 414 434 - -
Tsu01g00707 676 Pfam HCO3- transporter family 190 371 IPR011531 GO:0006820|GO:0016021
Tsu01g00707 676 Pfam HCO3- transporter family 3 177 IPR011531 GO:0006820|GO:0016021
Tsu01g00707 676 Pfam HCO3- transporter family 447 536 IPR011531 GO:0006820|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g00707 Tsu-Chr1 6208259 6213531 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g00707 4 647 Antiporters AT5G25430 66.410 0.0 895
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g00707 K24194 - gmx:100787412 974.541
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g00707 01 6208259 6213531 Tsu01g00707 01 6208259 6213531 ECH
Tsu07g00617 07 4913609 4917682 Tsu01g00707 01 6208259 6213531 ECH
Tsu01g00707 01 6208259 6213531 Tsu07g00617 07 4913609 4917682 PCT