Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00703 ATGGCAAAGAAGAAGAACCCCATGGTGTTTATGAATGTGTCTATAGATGGGGATCCGGGTGAAATAATGGTTTTCGAGCTTTACTATGATGTTGCTCCAAAGACTGCTGAAAATTTCCGTGCACTGTGTACCGGAGAAAGAGGAGTCAGCCCCAATACTGGAAAACCACTGCACTATAAGGGTTCCTTCTTCCATCAGATTGTAAAAGGCTCTATTGTTAGGGGTGGTGATTTTATCAATCGAAATGGGACTGGTGGAGAAAGCATATACCCCAAGTTCCCAGACGAGTCTCCTAGGCTAAAGCATGATTCTCCTGGCCTTCTATCGATGGCAATTGCTGATCGTGACACTCTCGGTTCACATTTTATCATCACTTTGAAAGCTGATCACCATCTTGATAGGAAGCATGTAGTTTTTGGCAAGATTGTGCGAGGTTATGATatcttgaagaaaattgaagatgtaGGCGATGAAGAAGGGCTCCCAACCGTAActgttaaaataattaattgtggTGAACATAATGAGGATACAAAGAAGACACACAAGTTAAAAATTGGAAGGAACGGATCTTCTGAAGCCAATAGTCATGAAGTGCGGAGGAAGGGAAAGCATAAAAAATCTTCAGGAGACCGaaggaaaaagagaaaacattaCTCATCAGAATCAGATAGTTCCTCCGATTCTGACATTGAATCTTCATCAAGTGAATCTTCATTAAGTGATAGTGACTCTGACTCAGACGTGTCCTTGTCATCTTACACAAGTTCATCTAGTGATGACAGgcggagaaaaagaaagagatctAGGAAAGATAAACGTACACATGGAAAAAGGAGAGATAAACGTCGAGAAAAGCGGCGAAGGAAACAAGATAAGAGATCAAAACGTAAATCAAGGAGGGAATCAAGCAGTGATACTGATGCAGATAGTGCAAGTAAGAGTGACGATGGCAAAGGTCTTGATACTCAAGGGAGAATTCAGAAGCATAAGGGTCATTCTCAGAGAGATGCTGAAGTCCAGTCATCCTCAGTTTTGGAGAAAGAATTACCTCCTATGAGTCATAAAAGGAGGGAGGGGGATGACATGTTAGGGGAGGAAGAATTCCCAAAAGAAAATGGAGTGCAGCGTAGCAACGGCATTGGGGTCAACCATAGCCCTGACGGAAGTGAAGAGAGGCAGCCTGATGTGATGGATGATAATCCAGGAAAATCTAGGAGTCGAAGCATGAGCCCTAAGCAAAATGTGAGCAAGAGTATGAGTATTAGTCCCAAGTGTGTGTGCAAAAGCCCGAGCATTAGTCCAAAAGGGAGGTTGAGCAGAAGTCCAAGTGGTAGTAAGAGCCCACATGCTCCATCACGGAGGAGTTTGAGCAGGAGTCTGGTTAGAAGCATCAGCAGAAGCCCCGTGAGAGGGAGGAATGGGAGAAGTATTAGTAGAAGCCCTATAAGAACACACATTCATAGAAGTGTCAGCAAGAATCCTGTGAGAAGTCCTGACCATAGAAGTTTTAGCAAAAGCCCTGCCAGATCTGTTTCTCTCAGCCGCAGAAGCAGAAGTTCTGCTAGAGTATCATCACGAAGAACAGTCAGTAGGAGCCCTGTGAGAATGTCAAGAAAGAGCATCAGCAGGAGTCCAGTTAGCCGAAGTCCTGTTAGAATGGCAAGCAGAGGCAATCAACGCAGCTATTCCAGGAGTCGTAGCCCTGTTCGTAGTAGGGAAAAGGCACCTCGTGAAAGGAGTCTGTCAAGGAGTGTGTCACCTGATGCTTCACCAAAACGTATCAGGAGAGGAAGAGGTTTCAGTGAACGATACTCATATGCTAGAAGATACAGAACACCCTCCCAGTCTCCTGTGAGGTACCGCTATAATGGAAGGAATGACCGGGACAGATATTCAGGATACAGAAGGTACTCCCCTAGACGTTTTAGGAGCCCACCGCCACGGAGAAGAACTCCACCAAGGTACCGAAGCAGGAGAAGCAGGACACCATCTGTATCTCGCAGTCCACCATACCGAGCACCACGTCGGTATAGCCCAAGCCTCAGCCCAGTTCGCAACCGCTCACCTGCTCGTAAGGATAGGCGCATATCATTATCTCCCAGCAGGAGTCCATCTCGACCCAGGTCCAGGTCTTCAGTGGAATCACAGTCTCCAAAAAAAGCAAGCAGAGATAACAGGTCAAGGTCTTCGTCTAGAAGCTCAGATGGAAAGAAAGGCCTGGTCTCGTATGGAAATGGCTCTCCTGATTCAATTGATAGGTGA 2265 0.445 MAKKKNPMVFMNVSIDGDPGEIMVFELYYDVAPKTAENFRALCTGERGVSPNTGKPLHYKGSFFHQIVKGSIVRGGDFINRNGTGGESIYPKFPDESPRLKHDSPGLLSMAIADRDTLGSHFIITLKADHHLDRKHVVFGKIVRGYDILKKIEDVGDEEGLPTVTVKIINCGEHNEDTKKTHKLKIGRNGSSEANSHEVRRKGKHKKSSGDRRKKRKHYSSESDSSSDSDIESSSSESSLSDSDSDSDVSLSSYTSSSSDDRRRKRKRSRKDKRTHGKRRDKRREKRRRKQDKRSKRKSRRESSSDTDADSASKSDDGKGLDTQGRIQKHKGHSQRDAEVQSSSVLEKELPPMSHKRREGDDMLGEEEFPKENGVQRSNGIGVNHSPDGSEERQPDVMDDNPGKSRSRSMSPKQNVSKSMSISPKCVCKSPSISPKGRLSRSPSGSKSPHAPSRRSLSRSLVRSISRSPVRGRNGRSISRSPIRTHIHRSVSKNPVRSPDHRSFSKSPARSVSLSRRSRSSARVSSRRTVSRSPVRMSRKSISRSPVSRSPVRMASRGNQRSYSRSRSPVRSREKAPRERSLSRSVSPDASPKRIRRGRGFSERYSYARRYRTPSQSPVRYRYNGRNDRDRYSGYRRYSPRRFRSPPPRRRTPPRYRSRRSRTPSVSRSPPYRAPRRYSPSLSPVRNRSPARKDRRISLSPSRSPSRPRSRSSVESQSPKKASRDNRSRSSSRSSDGKKGLVSYGNGSPDSIDR 754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00703 754 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 19 172 IPR002130 GO:0000413|GO:0003755
Tsu01g00703 754 MobiDBLite consensus disorder prediction 642 662 - -
Tsu01g00703 754 MobiDBLite consensus disorder prediction 298 337 - -
Tsu01g00703 754 MobiDBLite consensus disorder prediction 435 481 - -
Tsu01g00703 754 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP63 1 359 - -
Tsu01g00703 754 MobiDBLite consensus disorder prediction 226 257 - -
Tsu01g00703 754 MobiDBLite consensus disorder prediction 263 297 - -
Tsu01g00703 754 Gene3D - 1 174 IPR029000 -
Tsu01g00703 754 MobiDBLite consensus disorder prediction 567 582 - -
Tsu01g00703 754 MobiDBLite consensus disorder prediction 505 566 - -
Tsu01g00703 754 MobiDBLite consensus disorder prediction 389 403 - -
Tsu01g00703 754 MobiDBLite consensus disorder prediction 200 214 - -
Tsu01g00703 754 MobiDBLite consensus disorder prediction 701 717 - -
Tsu01g00703 754 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 10 173 IPR002130 GO:0000413|GO:0003755
Tsu01g00703 754 SUPERFAMILY Cyclophilin-like 4 178 IPR029000 -
Tsu01g00703 754 MobiDBLite consensus disorder prediction 350 373 - -
Tsu01g00703 754 MobiDBLite consensus disorder prediction 590 606 - -
Tsu01g00703 754 MobiDBLite consensus disorder prediction 404 428 - -
Tsu01g00703 754 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 1 359 - -
Tsu01g00703 754 MobiDBLite consensus disorder prediction 178 754 - -
Tsu01g00703 754 MobiDBLite consensus disorder prediction 718 734 - -
Tsu01g00703 754 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 27 42 IPR002130 GO:0000413|GO:0003755
Tsu01g00703 754 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 121 133 IPR002130 GO:0000413|GO:0003755
Tsu01g00703 754 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 134 149 IPR002130 GO:0000413|GO:0003755
Tsu01g00703 754 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 64 76 IPR002130 GO:0000413|GO:0003755
Tsu01g00703 754 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 106 121 IPR002130 GO:0000413|GO:0003755
Tsu01g00703 754 MobiDBLite consensus disorder prediction 623 637 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g00703 Tsu-Chr1 6173749 6181086 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g00703 25 169 U-box Gene Family AT5G67530 39.865 8.18e-20 92.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g00703 K09566 - jre:109001815 610.142
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g00703 01 6173749 6181086 Tsu01g00703 01 6173749 6181086 ECH