Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00690 ATGAGAAATCATTGGCCTCTCATCAATATTGTAAATACCCTATGGTTATGTTTTTGCATCCTACTTTTCTCTAAAGTAGTTTTGGTTTTGGCTGGTACTCAATGGATTGGTAAGATCTCACCTGAATTTGAAGGCTCACAAATGAATTGGATTGACAAAAATGGCATGTTTCTTCTATCAAACAAACAAGAATTTGGTTTTGGCTTTGTCAGAACTTCAAATGACAGCACATTATTTCTACTTGCAATAGTCCACATAGAAAGCACAAGAAATGTTTGGACTGCAAATAGAGAATTTCCTGTTTCAAATTCAGACAAATTTGTGTTTGATGAAAAGGGTAATGTTTTCTTACAAAAAGGAAGTGTCTTGGTTTGGTCAACAAACACAAGTGACATGAAAGTTTCTTCAATGGAATTACAAGATAATGGAAACTTAGTTTTGCTTAGAAATGATAGTAAAGTTATTTGGCAAAGTTTTGATTATCCAACAGATACTTTATTGCCAATGCAAAACTTCACCAAAGGAATGAAACTTATCAGTGAACCTGATCCTGACAATTTGACTTATGTTCTTGAAATTGAATCTCAAACTGGTAATGTTATTCTTTCCACAGGTTTACAACCTCCACAACCTTATTGGTCTATGCAAAAAGATAACCGAAACATCGTTAATGAAAACGGTGATGAAGTAGCTTCTGCAACTCTTGATGAAAATTCTTGGAAGTTTTATGACAAAGAGAAATCATTGTTGTGGCAATTTATTGTTTCTGATTCTGATGCTGCAAGTGCAAATTCAATTTGGATTGCTGTTTTAGGAAATGATGGATTTATCACTTTCTATAATCTTCAAAATAGAGACTCAATTGCTTcatcaaaaacaacaataccAAAAGATTCTTGTAGTACACCACAACCTTGTGGTCCTTACAACATTTGCAGTGGTGACAAAAAATGTAGTTGTCCGTCTGTTCTTAGCTCTAGACGTAGTTGCGAACCGGGTTTTGTTTCGCCTTGTGAGTCAAAAAGTTCCATTGAGCTCATGAAAGTTGATGATGGGCTTAATTACTTTGCACTTGGATTTCTTCAACCTTCTTCGAAAACCGATTTGATTGGTTGCAAAAATTCTTGTAGTGTAAACTGTTCATGTCTTGCTATGTTCTTTCAGAAAAGTTCAGGTAATTGTTACCTCTTAGACAGAATTGGAAGCTTTGAGAAACCTGATAATGATTCTGGTTTTGTCTCTTACATTAAGGTGTCGAGAGATGGAAGCACAGACACAGGAGAGAAAGGAAACAAGAATAAGCAAATAATAGTTGTTGTGATAATTGTCATAGTAACATTGTTTATCATTTCTGGCATGATCTATGTAGGACTAAAGAActtaaagaaaaaggaaaatccGTCTGACTCTCCGGAGGAGATTTCAGACGATGAAGCCAATTTCTTGGAGGGTATAACTAGTATGCCAATCCGTTTCAGCTACAACGATCTAGAAACTGCGACGAGTAACTTCACGGAGAAGTTAGGTCAAGGTGGTTTCGGCTCGGTTTATAAAGGAGTACTAAAAGATGGAACTCAAATAGCTGTGAAACAGTTGGAAGGAATTGGTCAAGGGAAGAAAGAATTTAGAGTTGAAGTTAGCGTCATTGGAagcattcatcatcatcatttggTAAGGCTTAAAGGGTTTTGTGCTGAAGGATCTCATAAACTTCTTGTTTATGAATATATGGAAAATGGTTCATTGGACAAATggatattcaaaaaaaaaaaagaagaattaccTTTGGATTGGAACACAAGGTACAATATTGCAGTAGGAACAGCTAAAGGACTAGCTTATCTACATGAAGATTGTGATTCAAAGATTGTTCATTGTGATATTAAACCAGAAAATGTGCTTTTAGATAATAATTTTGAAGCCAAAGTTTCGGATTTCGGTCTTGCGAAGCTCATGAACCGCGAACAAAGTCATGTTTTCACAACAATGAGAGGAACAAGAGGTTATTTAGCACCAGAATGGATAACAAACTATGCTATATCAGAGAAAAGTGATGTTTATAGCTATGGAATGGTATTGTTAGAGATTATTGGAGGAAGGAAAAACTATGATCCTAAAGAAAATTCGGAGAAATCGCATTTTCCTTCTTTTGCTTATAAGATGATGGAACAAGGGAAGATGGAAAATGTAATTGATTCTGAGGTGAAAATGATTGAAAATGATGTGAGAGTTGAGATTGCTTTGAATGTTGCATTTTGGTGTATACAAGAAGATATGAGTTTAAGGCCTTCTATGAATAAAGTTGTACAAATGCTTGAAGGTTTATGTGATGTTCCTAAGTTACCAAATGTGTCTCCATTAGGTTCtcatttttattcaaattttcttAGACCAACAAGTGAGAGTGGCACTTCTTCAGAGCCAACAGATGGGAATAGTGATGCATATCTCTCTGCTGTTAGACTTTCGGGGCCAAGGTAA 2481 0.3414 MRNHWPLINIVNTLWLCFCILLFSKVVLVLAGTQWIGKISPEFEGSQMNWIDKNGMFLLSNKQEFGFGFVRTSNDSTLFLLAIVHIESTRNVWTANREFPVSNSDKFVFDEKGNVFLQKGSVLVWSTNTSDMKVSSMELQDNGNLVLLRNDSKVIWQSFDYPTDTLLPMQNFTKGMKLISEPDPDNLTYVLEIESQTGNVILSTGLQPPQPYWSMQKDNRNIVNENGDEVASATLDENSWKFYDKEKSLLWQFIVSDSDAASANSIWIAVLGNDGFITFYNLQNRDSIASSKTTIPKDSCSTPQPCGPYNICSGDKKCSCPSVLSSRRSCEPGFVSPCESKSSIELMKVDDGLNYFALGFLQPSSKTDLIGCKNSCSVNCSCLAMFFQKSSGNCYLLDRIGSFEKPDNDSGFVSYIKVSRDGSTDTGEKGNKNKQIIVVVIIVIVTLFIISGMIYVGLKNLKKKENPSDSPEEISDDEANFLEGITSMPIRFSYNDLETATSNFTEKLGQGGFGSVYKGVLKDGTQIAVKQLEGIGQGKKEFRVEVSVIGSIHHHHLVRLKGFCAEGSHKLLVYEYMENGSLDKWIFKKKKEELPLDWNTRYNIAVGTAKGLAYLHEDCDSKIVHCDIKPENVLLDNNFEAKVSDFGLAKLMNREQSHVFTTMRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEIIGGRKNYDPKENSEKSHFPSFAYKMMEQGKMENVIDSEVKMIENDVRVEIALNVAFWCIQEDMSLRPSMNKVVQMLEGLCDVPKLPNVSPLGSHFYSNFLRPTSESGTSSEPTDGNSDAYLSAVRLSGPR 826
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00690 826 CDD STKc_IRAK 508 775 - -
Tsu01g00690 826 ProSitePatterns Serine/Threonine protein kinases active-site signature. 623 635 IPR008271 GO:0004672|GO:0006468
Tsu01g00690 826 Gene3D - 49 160 IPR036426 -
Tsu01g00690 826 SUPERFAMILY alpha-D-mannose-specific plant lectins 91 180 IPR036426 -
Tsu01g00690 826 Gene3D Phosphorylase Kinase; domain 1 468 576 - -
Tsu01g00690 826 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 123 293 IPR011047 -
Tsu01g00690 826 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE SD2-5 2 826 - -
Tsu01g00690 826 ProSiteProfiles Bulb-type lectin domain profile. 42 160 IPR001480 -
Tsu01g00690 826 CDD B_lectin 51 162 IPR001480 -
Tsu01g00690 826 Gene3D Transferase(Phosphotransferase) domain 1 577 778 - -
Tsu01g00690 826 SMART serkin_6 502 772 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu01g00690 826 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 2 826 - -
Tsu01g00690 826 SUPERFAMILY Protein kinase-like (PK-like) 485 773 IPR011009 -
Tsu01g00690 826 MobiDBLite consensus disorder prediction 799 826 - -
Tsu01g00690 826 ProSitePatterns Protein kinases ATP-binding region signature. 508 530 IPR017441 GO:0005524
Tsu01g00690 826 SMART blect_4 49 162 IPR001480 -
Tsu01g00690 826 PIRSF SRK 11 822 IPR024171 GO:0004674
Tsu01g00690 826 Pfam D-mannose binding lectin 92 173 IPR001480 -
Tsu01g00690 826 ProSiteProfiles Protein kinase domain profile. 502 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu01g00690 826 MobiDBLite consensus disorder prediction 799 813 - -
Tsu01g00690 826 Pfam Protein kinase domain 505 770 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g00690 Tsu-Chr1 6065937 6069528 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g00690 478 783 Receptor kinase-like Gene Family AT5G20050 47.040 1.35e-91 294
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Tsu01g00690 Pkinase 3.7e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g00690 - - gmx:100787500 1177.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g00690 01 6065937 6069528 Tsu01g00690 01 6065937 6069528 ECH
Tsu07g00655 07 5195822 5198754 Tsu01g00690 01 6065937 6069528 ECH
Tsu01g00690 01 6065937 6069528 Tsu07g00655 07 5195822 5198754 PCT