Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00688 ATGGCGGAAACTAGTTTATCGTTGATAGTTCCGaacacaaagaagaaaacacctcaattttcttcttcttcttcttcaattgaGCTTTTTTGTAGGAACACTTTGTTCTATGATAAGCTTCCTTCACAACCTTTAAGACTTTCTGTTCTCAAATTAGACGGTTCTTCTTTCGATATTCAAGTTTCGAAAACCGCAACTATTGCGGAGCTTAAGGATGCAGTAGAAGCTGTTTTCAGTTACATGCCTCAGCATGGTCCTGGCAAAATTTCATGGCCACATGTTTGGGGGCAGTTTTGCTTATGCTATGACGGAAGGAAGCTAGTCACAGAAGAGGATCATCTTAGAAATTATGGTGTCAAGGATGGTGACCAGCTCAATTTTATCCGCCATGTATCAAACAATTGCGGTGTTCAAAGAAAGCGGTCAAAGAAAAGAGTTTTCCATTTGAAACAAAACAGGAGGTGCAAATCGTCGCAAGTGAGTTACTGCAAACAGAATGAAAATtgcgatgatgatgatgatggtaatATCGGTTCTGATGAGGAAGCCTTAGAGAATGCAGAGACCAAGCACCACATTGAAGAAGTGCATGTTAGAAAGAACAAGTTTACTGGCTTTGTGGGAGACTTGTTGTACACACCGCTAGCAGTCGTGAGAAAAACTAGAACTCAAAACCAGATTTTCCCGTCCACCATTTCCAGGTGTTTGATCGGCGGGCTTAAAAAGATTAGAAGGATTGTATGTTCTGGCAGGAGGCAGCAGATTCCTCGTTGGTTTGTTCTTCATTTCTCCGAGATTCCAGTATTGTTCCGAAACCATTGCAAAGGTTGTTTATTTAACACAATCTCAAATTCCGGAATGGCTAGAGAAGTCATGGCTTCTTCATCAACTGCTCCTTTTGATTATGAGATCTTGGACAAAGATCCTGACATCCCTAAAACTGCTGGACTTCCATCTAATCGCACAAATCCGTGGATTGAACCTGAAACGTTGAAACTTCAACACCGAATTGGTCGAGGACCGTTTGGTGATGTTTGGCTTGCAACTCTTCATCAGTCAACTGAAGATTATGATGGACACCATGAAGTTGCTGCTAAGATGTTACATCCAATCAGAGAGGATCATGTTAAGACTGTACTTGAGAAGTTCAATGAGTTATACCTTAAGTGCCAAGGAATTTCTAATGTTTCCTGGATACATGGAATTTCAATATTAAATGGAAGGATCTGCGTCATTATGAATTTGTATGAGGGTTCAATTGGTGACAAGATGGCTAGACTCAAAGAGGGTTGGATTTCATTACATGATGTATTGAGGTATGGGATCAATCTGGCTCAAGGCATTCTGGAGCTTCACTCTAAAGGGATCATTGTTCTCAACCTTAAACCATGTAATGTTCTTCTCGACAACAATGATCAAGCAATTTTGGGAGATGTTGGTATTCCCAATCTTTTGCTTGGCTCCTCATTTGTTAGCTCAGATATTGCTCAGAGGCTTGGAACTCCTAATTACATGGCTCCAGAACAATGGAAACCAGAGGTCAGAGGCCCTATATCATTAGAAACGGATTCATGGGGATTTGGGTGCACCATTGTTGAAATGTTGACTGGTAATCAACCTTGGTATGGATGCTCTGTTGGTGGAATATACGGATCAGTTGTTGAAAAGCATGAAAAGCCGCATATCCCAAGTGGCCTTCCTTCTGCCATTGAGAATATCCTTAGTGGATGTTTTGAGTATGATTTGAGGAATCGCCCTCTGATGGCAGATATTCTGCGAGTCTTTAAAAGCTCACTGAAGGAACTGGCCAGTGATGGAGGATGGAGATATCAAGGAAATCTGAAAGTAATCCCAAAATCAGGCAGCACTGACTACACTGAATGGTTCCTCACAAAGGATCATCTTCAGGTTGGCGACATGGTCCGATCCAGAAAGCCTCCCAACTCATGCAAAGCTCAAAACATGATTGTTCCAGAAGGAACTGTTGTTGGCCTAGAACGTACTGCAGATAACAGATTCGTTCTTGTGAGGGTCCACGGTATTCACGACCCTAAAAGAATTCACGTGTCAACTCTTGAACGCGTCACAAATGGCTTGGCAGCTGGTGATTGGGTACGTGTGAAAGATAAAAATGTGAAACACTCACCAGTGGGCATTCTACATTCCATCAACCGCGATGACAATACAGCTGCTGTTGGATTAATCGGCCTGCAAACTCTATGGAATGGAAATTCTTCAGAACTCGAAATGGCAGAATCATTCTGTGTGGGCCAGTTTGTTAGGCCAAAAGAGAATGTTTTAAGCCCTCGATTCGATTGGCGCCGTAAAAGGTGCGGGACCTCGGCTACTGGTAGGATTTCATGGATACTACCAAATGGGTGTTTGGTTGTCAAATTTCCAGGGTTGGTGACTTTTGGGAAGGAATCAAACACCTTCTTGGCTGATCCTTCTGAGGTTGAAGTGGTTGATTTTAAGACTTGTCCTGGGATGATAGAAAAGTATCAACATGTTGAGGATCATCATTGGGCAGTTAGACCTGTTCTAGTTGCACTTAGCATATTTACAGCTTTCAAACTAGGCATATTAGTTGGAAACAAAGTGAGAAGGTGCAAGAAGATCAATGCAATAGTAAACAAAAACCAACATGTTGAAGGTCAGAACACAAACAGTCCTACAAAGAGTACAACTCATGGCAATACAACATGGGTTCCTTCAGTTGCTAATATCCTTTTTAAAGATGGTGCTTAA 2748 0.409 MAETSLSLIVPNTKKKTPQFSSSSSSIELFCRNTLFYDKLPSQPLRLSVLKLDGSSFDIQVSKTATIAELKDAVEAVFSYMPQHGPGKISWPHVWGQFCLCYDGRKLVTEEDHLRNYGVKDGDQLNFIRHVSNNCGVQRKRSKKRVFHLKQNRRCKSSQVSYCKQNENCDDDDDGNIGSDEEALENAETKHHIEEVHVRKNKFTGFVGDLLYTPLAVVRKTRTQNQIFPSTISRCLIGGLKKIRRIVCSGRRQQIPRWFVLHFSEIPVLFRNHCKGCLFNTISNSGMAREVMASSSTAPFDYEILDKDPDIPKTAGLPSNRTNPWIEPETLKLQHRIGRGPFGDVWLATLHQSTEDYDGHHEVAAKMLHPIREDHVKTVLEKFNELYLKCQGISNVSWIHGISILNGRICVIMNLYEGSIGDKMARLKEGWISLHDVLRYGINLAQGILELHSKGIIVLNLKPCNVLLDNNDQAILGDVGIPNLLLGSSFVSSDIAQRLGTPNYMAPEQWKPEVRGPISLETDSWGFGCTIVEMLTGNQPWYGCSVGGIYGSVVEKHEKPHIPSGLPSAIENILSGCFEYDLRNRPLMADILRVFKSSLKELASDGGWRYQGNLKVIPKSGSTDYTEWFLTKDHLQVGDMVRSRKPPNSCKAQNMIVPEGTVVGLERTADNRFVLVRVHGIHDPKRIHVSTLERVTNGLAAGDWVRVKDKNVKHSPVGILHSINRDDNTAAVGLIGLQTLWNGNSSELEMAESFCVGQFVRPKENVLSPRFDWRRKRCGTSATGRISWILPNGCLVVKFPGLVTFGKESNTFLADPSEVEVVDFKTCPGMIEKYQHVEDHHWAVRPVLVALSIFTAFKLGILVGNKVRRCKKINAIVNKNQHVEGQNTNSPTKSTTHGNTTWVPSVANILFKDGA 915
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00688 915 SUPERFAMILY Protein kinase-like (PK-like) 330 594 IPR011009 -
Tsu01g00688 915 Pfam Protein tyrosine and serine/threonine kinase 331 593 IPR001245 GO:0004672|GO:0006468
Tsu01g00688 915 PANTHER OS06G0639500 PROTEIN 287 914 - -
Tsu01g00688 915 ProSiteProfiles Protein kinase domain profile. 331 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu01g00688 915 CDD Ubl_SNRNP25 45 130 IPR040610 -
Tsu01g00688 915 Gene3D Transferase(Phosphotransferase) domain 1 417 615 - -
Tsu01g00688 915 SUPERFAMILY Ubiquitin-like 40 136 IPR029071 -
Tsu01g00688 915 Gene3D - 40 138 - -
Tsu01g00688 915 Pfam Ubiquitin-like domain 45 131 IPR040610 -
Tsu01g00688 915 Gene3D Phosphorylase Kinase; domain 1 309 415 - -
Tsu01g00688 915 PANTHER OS06G0639500 PROTEIN 287 914 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g00688 Tsu-Chr1 6047510 6056593 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g00688 311 602 MAP Kinase Kinase Kinase AT2G17700 25.676 2.02e-22 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-1 Tsu01g00688 PK_Tyr_Ser-Thr 2.1e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g00688 - - gsj:114393396 1007.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g00688 01 6047510 6056593 Tsu01g00688 01 6047510 6056593 ECH
Tsu07g00661 07 5256614 5259039 Tsu01g00688 01 6047510 6056593 ECH
Tsu01g00688 01 6047510 6056593 Tsu07g00662 07 5259933 5263288 PCT