Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00667 ATGCAATTGCCTTTCAAGCAACCTTTTGCACTTGTCAACATTGAATTGCTTGGAATACAGAACATGGTTGTGGTATGTGGTTCTGACATGGTTGTGACTCTTTCTCTGCAACTCTACCTCATCATCCATTCTCAGGGTTTCCAATTGTTCAGTTCAGACGCAACGTTATTTGCCATTTCATCCGTCGTTCTATGGATCAGTGTAATTTTCTGGAGTTGTCTGATCCGAAGCTTTGCAACTAATCTGAGCAATAATACTGCTTATTGGCCAGCATTTCCTTGCGGTGAGAGGGCAAGGGAGTCTTTTTCTTCCAGAGGGCAATTCTGTGTCACAAGCCCTGCCTCTGGTCTAAATTTTTGCAGCTCAAATATGCAACCGACATCAAAAACGGATTTTGAATGGTTCTCAGCTAACTATGCAACTCCTTCTGTGAGTGGGTGTCCTCGTGTCTTCTGCATGGGAAAAAATGGCCATCTTCTTATAAGCAATACAGGGCTTCTTGGTATTGTTTGCTCATGTCATTGTTTCCACATGTCTATACTTAAGTTTTGTGAGCATTCAGGGTTACACAGTGTCAACCCAGGGGATGCTGTTCGTATGGAAAGCGGAGAGACCATTGCACAGTGGAAGAAGTTGTATTTCTTAAAATTTGGAATTAGGTCTTTGGGAAATGAGAGTGAATGGGACTGGCCAGAAGTATTTTCAACAACAGGCAATCTGATGAAATTCAATGCATCTGCATCTGATATGTCCAAGAGTGATCTGTCACATATTTTGAATTCGGCTGCAGTCACATTAAGAAAACAACCGATACCAAACCAGGATGGTTGCAACATTCCACTACAGGGTTTAAACGCTTTTATGCAGAACAACATGCATGACCGGGTGAAAAGCCAGTTAATGGAATCTAATATGGCTATTTTTACACCTGCACCAAACTTTGTTGGAGTTCAACTGAATGATGGTGGTCAGCATATACCTCCTCTCCTTGATTCTCTGAAAAGGGATGGAAATTTGTCAATTACCCAGTCTACACAAATTCCAACAAGCCATAAAGACCATGCATGTATCAAAAAGAAGAATGTAAAGACTGGTATACTAGACAAAGATGCAACTTCCTCAAACATTGAGCTTAGGCTTGGTCAACCACATCGGGCAGGAAATCCAGTTGCATCATTTGTAGAATCACCATCGTTTACCTTTGGCAGTTCTCCAAAACTGCATTCCCTGAAGCAGATGACTAATACTCTTAGCTGGGAGGAGGAATTGCGGAATAATTTTAGTCATGCTGCCGGTTCATTCAAAATGCTTGAGGAACAACCTCTACTTAATCCTCAACACTATATGTCTGGATGTAGTAATATTTCAGGTGCTGCTACAGCTAGTTCACAAACTGACACTGTGGCCACGAGTTCATTGTTTTTACCATTTCCACAATTTACTTCTCAACCAAAGGGATTAACAAATGCTAGCGGAAATTTGGTGAATGATGGTATCCTGCCCAAGAACCTGCATTCTGAATATGGTACCATGCAATTTGGTTCTTCTAATGTTCTCTGGAATAGTAATGGTCACAAAGGAAGGCAATCAAATGATTCTGCACCAGAATTCAATAAATATTTGGACAATGATAATGGGGCAAGGGATGGTGAAGATTCCTGCACCAAAATAAGTTATGGATTTGAAGTAAATCAGTTCATGGAATTTGGCTCCATCAGAAGAACTGTTAGTGGCAGTGGTAGTTGTACTCCTGTTGTTAGCAGAAATATATATGAATCAAGCTTTGCATCAGATACATATGTGGGTGCAAATGCTTTGCGAGGTtcaaaaaatgtattttcttttGGACGAAGTAATCACTTGACTTTGGGGACAGCTGTTCCATTTGAAGGAAATTTGAAGAGCCTTCCCTATCTTGTTTCAAGCTCTACGTCAAATCAGAATTCTACACTGAAACAACGGGGTATTAATATGGATACTTACATGCTTGATGAAAATATGAGGTTGCTTGCATTGACACAGATGCTGGAGTTATCTAAGCAACATCAAGCTTTGTATTTTCATGATATGAATCAGAAGCTAGGGAAATCAAGTATTCCAAAAACTCAGAACTATATATACAAGGCTTCAGTACCTGAGCCGGGTTCTTCTGGTGCATCACTGAAATTGCCCCAAAATAGGGGGACTTGTGGAAATCATGAGATTACTGATGGTTTGAACAGATATTGTGATGTCTCTTCCTTAACACCAATACCCTTACAATCTAAAGAAAAGGAATCACAATGTAAACATTCCTATGATCTTCAAAATGATGGTCCGTCTTTGAGCCTTGGAATGAACAATACCAGATCAAGTGAAAAATACTCTGAGCAACAATCAGATGTACATTTTGCAGGCAAATATGCTAGTGCTGCTTGGGAAAACTGTTGCAGAAAAAGTGTTTGCACTGGAATTGAACCCTCTCACGATATTGTAAAAGAAAAGTTTGCAGATGCCAATGGTGTGACCTCTTTGAAGATAGTTTCAGAGTGTAGTAGAGATCAGAAGGCttcaaagaataaaaatatctaCTTTGAGCTAAGTGGATTAGATGGCCACGACACAGTAAAAATTGGCTCTCATACACCTCAGTGGAGAGATGTGCCGACTAAGGTCAGGAAGCCATTATGTGATGCAACAATTTTAGATCAGATGGATACTGTGTTGGATTGGGAAGGACAAGACAGTTCCCAAGTGGGAAACATTTCTACCAAAcgtttgaaaaaaattattgataggGAAGATTTGTTGAAAGGGCGGGAAAATTTTAATGTTTCTTCTGGATGTTCTGCTCCTGTTGTTTCTCAGGCCTCTGGGATGGAGGTGAGCAAGGTTGATTCTTGTAATGTAGATACTACATATGCTGGTTGTATTGAGAACCATGTGCTTGATAAAGGCTGGTCCTGTGATTTGGTTGAAAGCGAAAGAAGCGCAGAGTATGCAGGCTCAACCAGTGGGAGTGACTTGAAAAAAGGTTATCTGAGAGTCTTAAATGATCAACCATGCCGGAGTCTCCTTGACGATATTAAACTTTTAGATTCTTTGATTTGGAAGAAAGGGCAGGACCAAAATCATATAATGGTTAGTGCTAATTGTAGAGCCAGTCAATCTCACAAAGTCAAGAAGGGCTTCAAAGGAAAAGAGCGAAAGAGAAACAAGGTGAGAATTCTGGGTGCTTCATTGCTTCCTGGAATCTCTTGCTCATTGGATAACCAGATTGGAGAGAGTCCTGAAGCTTTTGATCCCCCTTCTAGTTTATCTGAAGAAATGCAACTGTACTCTTCATCTAGCCAACAAAGATCATCTAACAATGTTTCTATTGTTCAACCTACAACTAGTCACAGACCCTCTTCATTTTCATCTAAATTTCTctcttgtaataataataatctaaacAAACATCACAGAGATGAAGATAGCTGTGAGTCAGAATCAAATTCTCATGCCGAGTTTCACACATTACCTGGAATTTCTAGAATAAAGAAATCAAGGAAGGTTTTCACTTCTGATTGCTTTGGACATTTCCAAACGCAAGTACCATACTATGACGGACCAAAAAAATTTCTGCGGATGTTATCCTCTAGCAGTAAAGGAAGCGCTCATAGAATCAAAAGGCCAGTAGTGTGTGGAAAATATGGGGAAATATCTAGTGAATTATCAATTACAGAAGTACCAAAACCAGCGAAAATTGTCTCTCTTAGCAAGCTTCTTAGAACTTCCAAAAGATGTATGATCCCTACAACTGAAACACCTAGTCTAACAGCGAAAAAGAAATGGAGGACATTGGGCTCTGGAACAAGTTGGGGGCATAGCTGTGCGAAATCTGGTTTAAAAGCTAAGAAAGATAACGAATCCGAATATACAATAATTTGTGATGAAACAAATTCCGATGCGTCTATGGAAGGTTTTGAGAGAGGCCGCAAGCAAACTGTTTTTTACAAAAGGAAGAGAGATACCAAAGAAAGGCAGGGTGATATTTTAATCAGAGCTGATTCTCCATTGAAGGCTAAGAGCGGAGAAATTTGGAAACAGCGCAGCATTAACGAAATCATTACTAAACCTGTTCAGGAACACACAAACCTGTCCATCACCAATTCAGATTCTTTCTGCGGTGTCTGTCAAAGGTCAAGCAACGATGAAGTTAACAGTTTCTTGGGGTGTAGTAAATGTCTAATTAAAGTTCGTCAGGCTTGCGCTGGTATTTCAGCAGTACCTAAAAGAGGTCGAAGGTGTTGTAGACCATGCCAAACAACCTCAAAAGATATTGTGTGTTCAATTTGCAATCAACGGGGTGATTCGTGTATAGAGTGCACGAATGTTGATTGCTCTGTCAAGTTTCATCCTTGTGCTCATCAGAAGAACCCGTTGCAAATCGAACCTGAGGGAATTAATGGCGAGAAAGTTTCATTTTATCGAAGATCTGTGCTTCATGGTATTGGCCCTGAATGTCAGTCTACATATGATCCTACTTATGAGATGGACAGTCGAGAGGAAAAGGAATTCACCTGTGCTAGGACGGAGGGTTACAAGGGCCGTAAATGGGACGGTATCCAGAATAATCATAGCGGTGCCTTAAAACTCCAGGGCGGATGCTGTGTTCCGGATGAGCAGTTAAATGCTTGGATTCACATAAACGGGAAGAAATTGAGCTCAAAAGGAATTCCAAAATTTCCAGATTCAGATATCGAGCATGATTCTCGGAAAACATGTGCTCAGTACAAACAAATGAAGGGTCTTTTTGTATACAAATCTGGGATACATGGCCTTGGTCTTTATACTTCTCAATTAATATCTCAGGGTAGAATGGTTGTAGAGTATGTTGGTGAAATTGTGAGACAAAGTGTGGCTGATCAAAGAGAAATTGAATACATATCTGGAAGGAAGCTTCAGTACAAAAGTGCCTGCTACTTATTTAGGATAGACAATGAACATGTAATTGATGCCACAAGGAAGGGGGGGATTGCTCGATTTGTTAACCACTCATGTCTGCCAAATTGCGTGTCGAAAGTGATTACTGTCAGGCGTATGAAAAAGGTTGTCTTCTTTGCAAAGAGGAACATACTTCCCGGTGAAGAGATTACTTACGATTACAAATTTAACTATGAAGATGAAGGAAAGAAAATTCCATGTTCCTGCAATGCAAAAACTTGCAGGCGCTCTCTGAACTGA 5208 0.3977 MQLPFKQPFALVNIELLGIQNMVVVCGSDMVVTLSLQLYLIIHSQGFQLFSSDATLFAISSVVLWISVIFWSCLIRSFATNLSNNTAYWPAFPCGERARESFSSRGQFCVTSPASGLNFCSSNMQPTSKTDFEWFSANYATPSVSGCPRVFCMGKNGHLLISNTGLLGIVCSCHCFHMSILKFCEHSGLHSVNPGDAVRMESGETIAQWKKLYFLKFGIRSLGNESEWDWPEVFSTTGNLMKFNASASDMSKSDLSHILNSAAVTLRKQPIPNQDGCNIPLQGLNAFMQNNMHDRVKSQLMESNMAIFTPAPNFVGVQLNDGGQHIPPLLDSLKRDGNLSITQSTQIPTSHKDHACIKKKNVKTGILDKDATSSNIELRLGQPHRAGNPVASFVESPSFTFGSSPKLHSLKQMTNTLSWEEELRNNFSHAAGSFKMLEEQPLLNPQHYMSGCSNISGAATASSQTDTVATSSLFLPFPQFTSQPKGLTNASGNLVNDGILPKNLHSEYGTMQFGSSNVLWNSNGHKGRQSNDSAPEFNKYLDNDNGARDGEDSCTKISYGFEVNQFMEFGSIRRTVSGSGSCTPVVSRNIYESSFASDTYVGANALRGSKNVFSFGRSNHLTLGTAVPFEGNLKSLPYLVSSSTSNQNSTLKQRGINMDTYMLDENMRLLALTQMLELSKQHQALYFHDMNQKLGKSSIPKTQNYIYKASVPEPGSSGASLKLPQNRGTCGNHEITDGLNRYCDVSSLTPIPLQSKEKESQCKHSYDLQNDGPSLSLGMNNTRSSEKYSEQQSDVHFAGKYASAAWENCCRKSVCTGIEPSHDIVKEKFADANGVTSLKIVSECSRDQKASKNKNIYFELSGLDGHDTVKIGSHTPQWRDVPTKVRKPLCDATILDQMDTVLDWEGQDSSQVGNISTKRLKKIIDREDLLKGRENFNVSSGCSAPVVSQASGMEVSKVDSCNVDTTYAGCIENHVLDKGWSCDLVESERSAEYAGSTSGSDLKKGYLRVLNDQPCRSLLDDIKLLDSLIWKKGQDQNHIMVSANCRASQSHKVKKGFKGKERKRNKVRILGASLLPGISCSLDNQIGESPEAFDPPSSLSEEMQLYSSSSQQRSSNNVSIVQPTTSHRPSSFSSKFLSCNNNNLNKHHRDEDSCESESNSHAEFHTLPGISRIKKSRKVFTSDCFGHFQTQVPYYDGPKKFLRMLSSSSKGSAHRIKRPVVCGKYGEISSELSITEVPKPAKIVSLSKLLRTSKRCMIPTTETPSLTAKKKWRTLGSGTSWGHSCAKSGLKAKKDNESEYTIICDETNSDASMEGFERGRKQTVFYKRKRDTKERQGDILIRADSPLKAKSGEIWKQRSINEIITKPVQEHTNLSITNSDSFCGVCQRSSNDEVNSFLGCSKCLIKVRQACAGISAVPKRGRRCCRPCQTTSKDIVCSICNQRGDSCIECTNVDCSVKFHPCAHQKNPLQIEPEGINGEKVSFYRRSVLHGIGPECQSTYDPTYEMDSREEKEFTCARTEGYKGRKWDGIQNNHSGALKLQGGCCVPDEQLNAWIHINGKKLSSKGIPKFPDSDIEHDSRKTCAQYKQMKGLFVYKSGIHGLGLYTSQLISQGRMVVEYVGEIVRQSVADQREIEYISGRKLQYKSACYLFRIDNEHVIDATRKGGIARFVNHSCLPNCVSKVITVRRMKKVVFFAKRNILPGEEITYDYKFNYEDEGKKIPCSCNAKTCRRSLN 1735
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00667 1735 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE TRITHORAX 108 1437 - -
Tsu01g00667 1735 Gene3D SET domain 1505 1735 IPR046341 -
Tsu01g00667 1735 Pfam SET domain 1601 1710 IPR001214 GO:0005515
Tsu01g00667 1735 PANTHER HISTONE-LYSINE-N-METHYLTRANSFERASE 2 KMT2 FAMILY MEMBER 108 1437 - -
Tsu01g00667 1735 CDD SET_SETD1-like 1584 1731 - -
Tsu01g00667 1735 SUPERFAMILY SET domain 1582 1731 IPR046341 -
Tsu01g00667 1735 MobiDBLite consensus disorder prediction 1086 1134 - -
Tsu01g00667 1735 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1368 1433 IPR013083 -
Tsu01g00667 1735 ProSiteProfiles SET domain profile. 1590 1711 IPR001214 GO:0005515
Tsu01g00667 1735 ProSiteProfiles Post-SET domain profile. 1719 1735 IPR003616 -
Tsu01g00667 1735 MobiDBLite consensus disorder prediction 1100 1134 - -
Tsu01g00667 1735 Pfam Tify domain binding domain 166 212 IPR032308 -
Tsu01g00667 1735 PANTHER HISTONE-LYSINE-N-METHYLTRANSFERASE 2 KMT2 FAMILY MEMBER 1434 1735 - -
Tsu01g00667 1735 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE TRITHORAX 1434 1735 - -
Tsu01g00667 1735 SMART set_7 1590 1717 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g00667 Tsu-Chr1 5896517 5911189 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g00667 1592 1731 C2H2 Transcription Factor Family AT2G23740 32.704 4.51e-16 82.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Tsu01g00667 SET 8e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g00667 - - cam:101492875 1899.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g00667 01 5896517 5911189 Tsu01g00667 01 5896517 5911189 ECH