Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00662 ATGAAAATGAAGTTTCTTCACATGATTCTCATTCTCATCCTTATTCTTCACAAACCCATTTGTATTCTTGCTTCTGATATAGACCCTCTTGTTCCCTCACCTCAAATTTCACCCTTTTCTTCAATTCTCACATCAATCACTGTTTCTGCTTCTTCTCCAGGCACAACATTCTCTCTCTCTCATAAAATGGATTCACACAAGAAAAAGATAATGGCTTTTGTGGCATCTAGCACTGCACTTGGTGCTATCATTTTGTGTATGTTAAGTTTCTGGATTTATCACATCAAGTATTCATCAAAATCCAACAAGAAAAAGTTTCAAAGCTCAgGTGGTTTTGGATGTGTTTACAAGGCTAGGTTGGATGATAATTTAGATGTTGCTATCAAGAGGTTGAACTGTGAATGTCAATATGCTGAAAGAGAATTTGAGAATGAGGTGGAATTGTTAAGTAAAATTCAACATCCAAATGTAATTTCTCTGCTTGGTTGTAGCAGTCATGAGGATTCAAGGTTTATTGTCTATGAGTTGATGCAAAATGGATCATTGGAAACTCAATTACAtgGACCATCTCATGGCTCAGCATTGACTTGGCATATGAGGATGAAAATTGCTCTTGACACAGCAAGAGCTTTAAAATATCTGCATGAGCACTGTTACCCTTCAGTAATCCATAGAGATCTGAAATCTTCTAATATTCTTTTAGATGCAAACTTCAATGCCaagGTTTCTGATTTTGGTCTTGCAATAACTGATGGGTCCCAAAACAAGAATAACATCAAGCTTTCAGGCACATTGGGGTATGTAGCCCCAGAGTATCTTTTAGATGGTAAATTGACTGATAAAAGTGATGTATATGCTTTTGGAGTTGTGCTTCTTGAGCTTCTATTAGGAAGGAAGCCTGTGGAGAAACTGAATCCATCTCAATGCCAATCTATTGTCACATGGGCCATGCCACAGCTCACAGATAGATCAAAGCTTCCAAACATTGTGGATAATGTGATTAAGAATACAATGGATCCTAAGCACTTATTCCAGGTTGCTGCTGTGGCAGTGTTATGTGTGCAACCAGAGCCATGTTACCGCCCTCTGATTGCAGATGTTCTACACTCTCTTATCCCTCTTGTACCTGTTGAGCTAGGAGGAACTCTCAGAGTTTCACAAGTGACACAGCAACCTGCGAATTCTAGTTAA 1191 0.3837 MKMKFLHMILILILILHKPICILASDIDPLVPSPQISPFSSILTSITVSASSPGTTFSLSHKMDSHKKKIMAFVASSTALGAIILCMLSFWIYHIKYSSKSNKKKFQSSGGFGCVYKARLDDNLDVAIKRLNCECQYAEREFENEVELLSKIQHPNVISLLGCSSHEDSRFIVYELMQNGSLETQLHGPSHGSALTWHMRMKIALDTARALKYLHEHCYPSVIHRDLKSSNILLDANFNAKVSDFGLAITDGSQNKNNIKLSGTLGYVAPEYLLDGKLTDKSDVYAFGVVLLELLLGRKPVEKLNPSQCQSIVTWAMPQLTDRSKLPNIVDNVIKNTMDPKHLFQVAAVAVLCVQPEPCYRPLIADVLHSLIPLVPVELGGTLRVSQVTQQPANSS 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00662 396 PANTHER BNAA04G14780D PROTEIN 109 392 - -
Tsu01g00662 396 Pfam Protein tyrosine and serine/threonine kinase 109 339 IPR001245 GO:0004672|GO:0006468
Tsu01g00662 396 ProSiteProfiles Protein kinase domain profile. 101 372 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu01g00662 396 SMART serkin_6 101 372 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu01g00662 396 ProSitePatterns Serine/Threonine protein kinases active-site signature. 222 234 IPR008271 GO:0004672|GO:0006468
Tsu01g00662 396 SUPERFAMILY Protein kinase-like (PK-like) 105 371 IPR011009 -
Tsu01g00662 396 Gene3D Transferase(Phosphotransferase) domain 1 177 376 - -
Tsu01g00662 396 PANTHER OS01G0750732 PROTEIN 109 392 - -
Tsu01g00662 396 Gene3D Phosphorylase Kinase; domain 1 93 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g00662 Tsu-Chr1 5838160 5842159 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g00662 99 375 Receptor kinase-like Gene Family AT3G58690 49.823 7.57e-89 272
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-X Tsu01g00662 PK_Tyr_Ser-Thr 5.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g00662 - - gmx:100812044 572.778
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g00662 01 5838160 5842159 Tsu07g00694 07 5560365 5563459 PCT