Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tsu01g00657 | ATggaaaaacaaagcaaagaAAGTACTCCTCAAAGTCCAAGCACACCATTACAAAATCAAcatgaaaagaagaaacaacAATCTATTGAtcatgaagaagaagagatcacAAAGGTAgatactttattatttgatcTAAATGAATCTACCAATGAAGATTCTATTCTTGTTTGTAATAATCAACAAGAAAAAGAACTCAATCTCATAACTTCTTTAGATGTTGGTAATTCAtcattagaaaataaaaacactcTTGAGGTAGAACAAAGAGTTTTCTCTTGTAACTATTGTCATAGAAAATTCTATAGCTCACAAGCATTAGGAGGACACCAAAATGCTCACAAAAGAGAGAGATCGATAGCGAAAAGAGGACAAAGATTTGGAACACAAATtataacttcatcttcttcttttggttttggttttggttttccTATTATGCATAATAAACAAACCTATGCAAACATGGCTTCTTTGCCTCTTTATGGTGCTtttggtaataataataaaccttTAGGAATTCAAGCACACTCTATGATCCATAAGCCTTCTAATGGATTTGGAAGCTCTTATggacatcatcatcatcatggtTGGTCAAACTCAAGAACATTTATGGATCAACAACCTGGAATAGCGAAACTAGGCGCGGAAAATTTTCATCGAGCGACAACATCGGCAGCATTATCATCATCAAGAGGAAGTGTTGGTAGATTTGAAGTGGTGGATGCAATGATGAACTCTGCAGCTAATAAAGAAATGAAGCAAAAACATCTTGATTTATCCCTCAAGCTATGA | 798 | 0.2719 | MEKQSKESTPQSPSTPLQNQHEKKKQQSIDHEEEEITKVDTLLFDLNESTNEDSILVCNNQQEKELNLITSLDVGNSSLENKNTLEVEQRVFSCNYCHRKFYSSQALGGHQNAHKRERSIAKRGQRFGTQIITSSSSFGFGFGFPIMHNKQTYANMASLPLYGAFGNNNKPLGIQAHSMIHKPSNGFGSSYGHHHHHGWSNSRTFMDQQPGIAKLGAENFHRATTSAALSSSRGSVGRFEVVDAMMNSAANKEMKQKHLDLSLKL | 265 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tsu01g00657 | 265 | Gene3D | Classic Zinc Finger | 70 | 138 | - | - | |
Tsu01g00657 | 265 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 94 | 114 | IPR013087 | - | |
Tsu01g00657 | 265 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 92 | 119 | IPR013087 | - | |
Tsu01g00657 | 265 | MobiDBLite | consensus disorder prediction | 1 | 32 | - | - | |
Tsu01g00657 | 265 | MobiDBLite | consensus disorder prediction | 7 | 22 | - | - | |
Tsu01g00657 | 265 | PANTHER | TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED | 5 | 265 | - | - | |
Tsu01g00657 | 265 | PANTHER | C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN | 5 | 265 | IPR044246 | GO:0009788 | |
Tsu01g00657 | 265 | SUPERFAMILY | beta-beta-alpha zinc fingers | 88 | 119 | IPR036236 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tsu01g00657 | Tsu-Chr1 | 5799735 | 5800730 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tsu01g00657 | 26 | 265 | C2H2 Transcription Factor Family | AT5G10970 | 39.464 | 9.29e-45 | 150 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tsu01g00657 | - | - | lja:Lj5g3v0526470.1 | 249.21 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Tsu01g00657 | 01 | 5799735 | 5800730 | Tsu07g00699 | 07 | 5663425 | 5664325 | PCT |