Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00630 atggctgtttcatcttcttcatctctttTGCTCCTTTTTCTTGTGTTTGGTTTTGCTGCTGCAGCTAAGGATTACTACCTTGATGGAAAGACTGGTGCTTGGAAGATTCCATCTTCTGAATCTGATTCATTCAACAAATGGGCTCAAAGTGTTCGTTTCCAAATTGGAGACCATCTAATTTTGAAATATGAAGCTGGAAAAGACTCGGTTTTGCAAGTTACAAAAGAGGATTATGTGAGTTGCAACATCTCAAACCCAATCAAACTCTACAATGATGGGTACACTAAAGTGAGATTTGATCATTCTGGTCCATACTACTACATCAGTGGAGAAAAGGGTCACTGTGAAAAGGGTCAGAAGCTTACTATAGTGGTTATGAGTCCAAGGGGAGCTGCTGGTAAGAGTCCTACTCCTGCTGTTAATTCACCTGCACCTTCACCAGCTGAGGTTGAAGGTCCTGGTCCTGCTGTTGCTCCAGCTCCAACTAGTAGTGCAACTCTTTTGCAAAATGGTGGTTTTTTTGTTGCTATGGGAGTTATTGTTGCTATGTGGCTTTTCTGA 561 0.3993 MAVSSSSSLLLLFLVFGFAAAAKDYYLDGKTGAWKIPSSESDSFNKWAQSVRFQIGDHLILKYEAGKDSVLQVTKEDYVSCNISNPIKLYNDGYTKVRFDHSGPYYYISGEKGHCEKGQKLTIVVMSPRGAAGKSPTPAVNSPAPSPAEVEGPGPAVAPAPTSSATLLQNGGFFVAMGVIVAMWLF 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00630 186 SUPERFAMILY Cupredoxins 25 126 IPR008972 -
Tsu01g00630 186 MobiDBLite consensus disorder prediction 130 157 - -
Tsu01g00630 186 Pfam Plastocyanin-like domain 34 119 IPR003245 GO:0009055
Tsu01g00630 186 PANTHER EARLY NODULIN-LIKE PROTEIN 3 5 181 - -
Tsu01g00630 186 PANTHER BLUE COPPER PROTEIN 5 181 IPR039391 GO:0009055
Tsu01g00630 186 Gene3D - 21 130 IPR008972 -
Tsu01g00630 186 ProSiteProfiles Phytocyanin domain profile. 23 127 IPR003245 GO:0009055
Tsu01g00630 186 MobiDBLite consensus disorder prediction 140 154 - -
Tsu01g00630 186 CDD OsENODL1_like 29 126 IPR041846 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g00630 Tsu-Chr1 5548926 5550353 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g00630 14 183 Phytocyanin Superfamily AT2G25060 53.801 1.60e-59 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g00630 - - gmx:100527857 206.068
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g00630 01 5548926 5550353 Tsu01g00630 01 5548926 5550353 ECH