Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00618 ATGGAATCAACATGTGTGGACACTTCTCTCAATCTTAACATTAATCATCCTTCTACCTCTACATACAAGGATGAAATTTTGGTTGAAGAGTTACATCGTCTCAATTGTGAGAACAAGAGGCTAAGTGAAACATTGAGCAACATGTGTGAGAATTATGAAGCTATGCAAAAGCAGTTGAGTCAATTGATGAATCAAAATTGTGAACACCAAATTCAAGAATCAAGGAAGAGAAAATCTGAGAGTGAAAATTGCAACAATATGTTTGGTACTATTAAAGGAATTAATAATGAGTGTAGCACTACTGATGAGGAATCACCAATCAAAAGGCCATGTAGGGAAATTTCATCACCTAAGGCTTATAAGGTTCTTGTGAAGACAGAAGCATCTAGTAACAGCTTATATGTGATGGATGGATATCAATGGAGAAAATATGGTCAGAAGGTTACTAGAGATAATCCTTCTCCTAGAGCTTACTTTAGGTGCTCTAATGCTCCAAGCTGCCCAGTTAAAAAGAAGGTGCAAAAAAGTTTAGAAGACCCTACTATACTAGTTGCAACATATGAAGGAGAGCACAACCATGGACATGAGAAAGCTGAAATATCAATGATATCAAACCAAATTGAAGAATCCTTTATAGGTTCAGTTCATGTTACTTCCCCTAAACAAATTATTCAAAGGACTTCTCCAACAATGAAGATTGACAATGTTCCAAAATCATCTATCCAACAATTTTTGGTTCAACAAATGGCTACTTCTTTGACAAATGATCCTAATTTCACTGCAGCACTTGCTAGTGCCATTTCTGGAAGAATTTTGGACCATACTTCTAATAAAGCCAATTGGTGA 846 0.3582 MESTCVDTSLNLNINHPSTSTYKDEILVEELHRLNCENKRLSETLSNMCENYEAMQKQLSQLMNQNCEHQIQESRKRKSESENCNNMFGTIKGINNECSTTDEESPIKRPCREISSPKAYKVLVKTEASSNSLYVMDGYQWRKYGQKVTRDNPSPRAYFRCSNAPSCPVKKKVQKSLEDPTILVATYEGEHNHGHEKAEISMISNQIEESFIGSVHVTSPKQIIQRTSPTMKIDNVPKSSIQQFLVQQMATSLTNDPNFTAALASAISGRILDHTSNKANW 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00618 281 SUPERFAMILY WRKY DNA-binding domain 132 195 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tsu01g00618 281 ProSiteProfiles WRKY domain profile. 130 196 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tsu01g00618 281 Coils Coil 31 65 - -
Tsu01g00618 281 PANTHER WRKY TRANSCRIPTION FACTOR 40-RELATED 19 274 - -
Tsu01g00618 281 SMART WRKY_cls 135 195 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tsu01g00618 281 Gene3D WRKY domain 119 195 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tsu01g00618 281 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 19 274 IPR044810 GO:0003700
Tsu01g00618 281 Pfam WRKY DNA -binding domain 137 193 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g00618 Tsu-Chr1 5459767 5461495 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g00618 3 271 WRKY Transcription Factor Family AT1G80840 45.424 2.32e-72 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Tsu01g00618 WRKY 2.8e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g00618 - - gmx:100810978 320.087
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g00618 01 5459767 5461495 Tsu07g00709 07 5820499 5822786 PCT