Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00591 ATGACACTATATTGGGGAAAAAACGTGACACTGTTATTTGATTCATGGAAGACCGATTCATGGACGAGTTATATACCGAGTTTAATCGCGTGTTTCGTGTTTGCTACTTTCTACCAATATCTGGAGAATATTCGGATTCGGCTGAAGTTTTTTTCCGGCGAGGGAAGGGGTGGTTCTACGGTGCCGGAGATTCAGACTCCTCTTCTGGGGTTGAATAAGGTTTCAAGAAATAAGGTTGCGGAATCGGTTTTGTTTGGGGTTAATTCTGCGATTGGGACTCAAGGTGAAGAAGATTCTGCAATTGTTGTTGATAGTTCTTGTGCATGTGCTTAG 333 0.4264 MTLYWGKNVTLLFDSWKTDSWTSYIPSLIACFVFATFYQYLENIRIRLKFFSGEGRGGSTVPEIQTPLLGLNKVSRNKVAESVLFGVNSAIGTQGEEDSAIVVDSSCACA 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00591 110 Pfam Ctr copper transporter family 1 48 IPR007274 GO:0005375|GO:0016021|GO:0035434
Tsu01g00591 110 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 1 92 IPR007274 GO:0005375|GO:0016021|GO:0035434
Tsu01g00591 110 PANTHER CTR FAMILY COPPER TRANSPORTER 1 92 - -
Tsu01g00591 110 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 31 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g00591 Tsu-Chr1 5182227 5182649 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g00591 1 92 Inorganic Solute Cotransporters AT5G20650 52.083 3.59e-26 93.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g00591 K14686 - gmx:100795071 122.479
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g00591 01 5182227 5182649 Tsu01g00591 01 5182227 5182649 ECH
Tsu07g00761 07 6275544 6277145 Tsu01g00591 01 5182227 5182649 ECH