Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00581 atGAGCTGCACTAACAAAATGACAGAGAGAAATTCAATAGCAGCAAATTCATCATCACCTGACAGTGATTTTAGCAACCAATGGTGTTTGGAACTCTCTGACTACATGAATTTAGATGACAACCAATGGCTACAAATTGATCCTACAACTGATCAGTCTTTTGTTTATCAAGCTAATGAAGCAGGTGGCAGCCACATTAATGAAGGGTCTTCTAGTACTACAAGAGATACTAATACCACTACTATGAGTGTTAAAGAGAGAGTTGCATTCAAAACAAAGTCAGAGATTGAAGTACTTGATGATGGTTATAGATGGAGGAAGTATGGAAAGAAAATGGTCAAGAATAGCCCCAATCCAAGGAACTATTATAGGTGTTCAGTGGAGGGATGTCCTGTAAAAAAGAGAGTTGAAAGAGATAAAGATGATATAAAGTATGTCATAACAACCTATGAAGGCATGCACACCCACCCAAATTCTTGCTAG 483 0.3768 MSCTNKMTERNSIAANSSSPDSDFSNQWCLELSDYMNLDDNQWLQIDPTTDQSFVYQANEAGGSHINEGSSSTTRDTNTTTMSVKERVAFKTKSEIEVLDDGYRWRKYGKKMVKNSPNPRNYYRCSVEGCPVKKRVERDKDDIKYVITTYEGMHTHPNSC 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00581 160 MobiDBLite consensus disorder prediction 1 24 - -
Tsu01g00581 160 ProSiteProfiles WRKY domain profile. 94 159 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tsu01g00581 160 Pfam WRKY DNA -binding domain 100 157 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tsu01g00581 160 SMART WRKY_cls 99 158 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tsu01g00581 160 SUPERFAMILY WRKY DNA-binding domain 92 157 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tsu01g00581 160 MobiDBLite consensus disorder prediction 60 80 - -
Tsu01g00581 160 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 7 159 IPR044810 GO:0003700
Tsu01g00581 160 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 7 159 - -
Tsu01g00581 160 Gene3D WRKY domain 86 152 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g00581 Tsu-Chr1 5122685 5123750 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g00581 20 156 WRKY Transcription Factor Family AT5G26170 46.497 1.03e-42 138
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Tsu01g00581 WRKY 6.1e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g00581 - - gmx:100796836 181.8