Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tsu01g00581 | atGAGCTGCACTAACAAAATGACAGAGAGAAATTCAATAGCAGCAAATTCATCATCACCTGACAGTGATTTTAGCAACCAATGGTGTTTGGAACTCTCTGACTACATGAATTTAGATGACAACCAATGGCTACAAATTGATCCTACAACTGATCAGTCTTTTGTTTATCAAGCTAATGAAGCAGGTGGCAGCCACATTAATGAAGGGTCTTCTAGTACTACAAGAGATACTAATACCACTACTATGAGTGTTAAAGAGAGAGTTGCATTCAAAACAAAGTCAGAGATTGAAGTACTTGATGATGGTTATAGATGGAGGAAGTATGGAAAGAAAATGGTCAAGAATAGCCCCAATCCAAGGAACTATTATAGGTGTTCAGTGGAGGGATGTCCTGTAAAAAAGAGAGTTGAAAGAGATAAAGATGATATAAAGTATGTCATAACAACCTATGAAGGCATGCACACCCACCCAAATTCTTGCTAG | 483 | 0.3768 | MSCTNKMTERNSIAANSSSPDSDFSNQWCLELSDYMNLDDNQWLQIDPTTDQSFVYQANEAGGSHINEGSSSTTRDTNTTTMSVKERVAFKTKSEIEVLDDGYRWRKYGKKMVKNSPNPRNYYRCSVEGCPVKKRVERDKDDIKYVITTYEGMHTHPNSC | 160 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tsu01g00581 | 160 | MobiDBLite | consensus disorder prediction | 1 | 24 | - | - | |
Tsu01g00581 | 160 | ProSiteProfiles | WRKY domain profile. | 94 | 159 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Tsu01g00581 | 160 | Pfam | WRKY DNA -binding domain | 100 | 157 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Tsu01g00581 | 160 | SMART | WRKY_cls | 99 | 158 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Tsu01g00581 | 160 | SUPERFAMILY | WRKY DNA-binding domain | 92 | 157 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Tsu01g00581 | 160 | MobiDBLite | consensus disorder prediction | 60 | 80 | - | - | |
Tsu01g00581 | 160 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 7 | 159 | IPR044810 | GO:0003700 | |
Tsu01g00581 | 160 | PANTHER | TRANSCRIPTION FACTOR WRKY FAMILY-RELATED | 7 | 159 | - | - | |
Tsu01g00581 | 160 | Gene3D | WRKY domain | 86 | 152 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tsu01g00581 | Tsu-Chr1 | 5122685 | 5123750 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tsu01g00581 | 20 | 156 | WRKY Transcription Factor Family | AT5G26170 | 46.497 | 1.03e-42 | 138 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Tsu01g00581 | WRKY | 6.1e-25 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tsu01g00581 | - | - | gmx:100796836 | 181.8 |