Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00567 ATGGGCACAATTGGCTACATAGATCCTGAGTATGCCAGAACTTCCCGTCTCACCGAGAAATCTGATGTCTACAGCTACGGTATTGTTTTACTTGAATTGCTAACTGGAAGAAAAGCTGTTGACAATGAATCCAACCTCCACCATCTAATTTTGTCCAAGACAGCTAGCAACGCAGTAATGGAAACCGCTGATCCCGATATTACTGCCACATGCAAGGACCTTGGAGCAGTAAAGAAAGTTTTTCAGCTTGCTCTATTATGCACAAAGAGGCAACCAGCCGATAGACCAACAATGCATGAAGTTGCACGTGTATTAGGAAGTCTTGTGCCGTCAATCACACCACCAAAACAACTAACTCCACTGCCTGCATCTCATCCATCTGCCAAAGTTCCATGCTACATGGATGAGTATGCAAATCTCAAGACACCACACTTGGTGAACTGTCCTTCCATGAGCACCTCAGATGCTCAACTCTTCCTCAAATTTGGAGAAGTAATCTCTCAGAACAGTGAATGa 516 0.4419 MGTIGYIDPEYARTSRLTEKSDVYSYGIVLLELLTGRKAVDNESNLHHLILSKTASNAVMETADPDITATCKDLGAVKKVFQLALLCTKRQPADRPTMHEVARVLGSLVPSITPPKQLTPLPASHPSAKVPCYMDEYANLKTPHLVNCPSMSTSDAQLFLKFGEVISQNSE 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00567 171 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 1 158 - -
Tsu01g00567 171 SUPERFAMILY Protein kinase-like (PK-like) 1 137 IPR011009 -
Tsu01g00567 171 Gene3D Transferase(Phosphotransferase) domain 1 1 113 - -
Tsu01g00567 171 ProSiteProfiles Protein kinase domain profile. 1 112 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu01g00567 171 Pfam Protein kinase domain 2 102 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu01g00567 171 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE ERECTA 1 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g00567 Tsu-Chr1 4992921 4994076 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g00567 1 170 Receptor kinase-like Gene Family AT5G62230 58.824 3.93e-57 190
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIb Tsu01g00567 Pkinase 2.3e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g00567 K20718 - lja:Lj0g3v0173389.1 316.62