Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00546 ATGATGTTTATTAATGTAATTTCAAGTGTCCCTTTGTCATCAACAATATTTACTTTGATGGCTTTAATAATAGGTGGATTATTGTGTTATTTGTATGGGCCATTTTGGAGATTAAGGAAAGTTCCAGGCCCACCTTCTCTTCCACTTGTAGGACATCTTCCATTACTAGCAAAGTATGGTCCAGATGTGTTCTCAATTCTTGCCAAGCAATATGGCCCAATTTACAGCAGATTTCATATGGGAAGACAACCACTAATAATCATAGCAGATGCTGAGCTTTGTAAAGAGGTGGGAataagaaaattcaaagatatTCCAAATAGAAGCATTCCCTCTCCTATCTCTGCTTCTCCTCTTCACCAAAAAGGTTTATTCTTCACAAGGGACTCGCAATGGTCTACGATGAGAAATACCATATTATCGGTATACCAACCATCACACTTAGCAAACTTAGTGCCTAAAATGCAATCATTCATAGAATCAGCAACAAAAAATCTTGATCACACCACAAAAGAAGACATAATCTTTTCCAATCTTTCCCTAAGATTAGCAACCGATGTTATTGGAGATGCAGCATTTGGTGTCAACTTTGGTCTCTCAAATCCTCATTCAATTTGTGAATCAATGAAAAGTGTTAACAATATTGTAGAACATTCAAGTGCTAGTAGTAGTGACGAAGTATCAAATTTCATCAATCAACATATTTACTCCACAACACAACTTAAGATGGATTTGTCTGGTTCATTCTCAATTATAATTGGTTTAATTGCTCCTATACTTCAAGAACCATTTAGACAAATTTTGAAGAGAATAAAGGGCACTATGGATTGGAAAATGGAATGTACTAACAAAAATTTAACCGGTCGTCTTGATGAGATTGTTAAGAAGAGAATGGAAGATAAGAATCGAATCTCAAAGAATTTCTTATCGCTTATATTGAATGCAAGAGAATCAAAGAGTGTGTCAGAAAGCGTGTTTTCATTTGACTACATAAGTGCTATAACTTATGAACACTTACTTGCCGGCTCGGCTACAACATCCTTTACATTGTCATCTATTGTCTATTTAGTTGCTGGTCACCTAAATGTTGAGGAAAAATTGCTTCAAGAGATTGATGGATTTGGAACACATGATAGGATACCTAATGCTAAAGATCTTAATGAAAGTTTTCCTTATCTTGATCAGGTGATTAAAGAGGCAATGAGGATTTATACTGTCTCTCCGTTGGTTGCAAGAGAAACATCAAGTGAAGTAGAGATAGGAGGTTACCTTCTTCCAAAGGGAACATGGGTATGGTTAGCACTTGGAGTTCTAGCAAAAGACTCAAGAAACTTTGCAGAGCCAGAAAAATTCAAACCAGAAAGGTTTGATCCCAAATgtgaagaaatgaaaagaagGCACCCTTATGCATTCATACCATTTGGAATTGGTCCAAGAGCATGTATTGGCCAGAAATTTTCCATGCAAGAGATCAAGCTTACTTTGATTCATTTATATAGAAAATATGTATTTCGTCATTCACTTAATATGGAAAAACCTTTAGAACTTGAATATGGTATGGTTCTTAACTTCAAGCATGGTGTCAAGCTTAGAGTTATAAAAAGAACATAA 1611 0.3482 MMFINVISSVPLSSTIFTLMALIIGGLLCYLYGPFWRLRKVPGPPSLPLVGHLPLLAKYGPDVFSILAKQYGPIYSRFHMGRQPLIIIADAELCKEVGIRKFKDIPNRSIPSPISASPLHQKGLFFTRDSQWSTMRNTILSVYQPSHLANLVPKMQSFIESATKNLDHTTKEDIIFSNLSLRLATDVIGDAAFGVNFGLSNPHSICESMKSVNNIVEHSSASSSDEVSNFINQHIYSTTQLKMDLSGSFSIIIGLIAPILQEPFRQILKRIKGTMDWKMECTNKNLTGRLDEIVKKRMEDKNRISKNFLSLILNARESKSVSESVFSFDYISAITYEHLLAGSATTSFTLSSIVYLVAGHLNVEEKLLQEIDGFGTHDRIPNAKDLNESFPYLDQVIKEAMRIYTVSPLVARETSSEVEIGGYLLPKGTWVWLALGVLAKDSRNFAEPEKFKPERFDPKCEEMKRRHPYAFIPFGIGPRACIGQKFSMQEIKLTLIHLYRKYVFRHSLNMEKPLELEYGMVLNFKHGVKLRVIKRT 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00546 536 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 474 483 IPR017972 GO:0005506|GO:0016705
Tsu01g00546 536 PANTHER THROMBOXANE-A SYNTHASE 9 536 - -
Tsu01g00546 536 PRINTS E-class P450 group I signature 471 481 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g00546 536 PRINTS E-class P450 group I signature 330 347 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g00546 536 PRINTS E-class P450 group I signature 481 504 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g00546 536 PRINTS E-class P450 group I signature 68 87 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g00546 536 PRINTS E-class P450 group I signature 434 458 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g00546 536 PRINTS E-class P450 group I signature 350 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g00546 536 PRINTS E-class P450 group I signature 394 412 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g00546 536 PRINTS E-class P450 group I signature 183 201 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g00546 536 PRINTS P450 superfamily signature 395 406 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g00546 536 PRINTS P450 superfamily signature 481 492 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g00546 536 PRINTS P450 superfamily signature 472 481 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g00546 536 PRINTS P450 superfamily signature 341 358 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g00546 536 Gene3D Cytochrome P450 32 536 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g00546 536 PANTHER CYTOCHROME P450 FAMILY PROTEIN 9 536 - -
Tsu01g00546 536 Pfam Cytochrome P450 42 519 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g00546 536 SUPERFAMILY Cytochrome P450 35 535 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g00546 Tsu-Chr1 4784073 4786967 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g00546 80 535 Cytochrome P450 AT2G26170 71.272 0.0 651
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g00546 K20771 - gmx:100805689 874.004
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g00546 01 4784073 4786967 Tsu07g00803 07 6583375 6589850 PCT