Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00522 ATGTTAACACCAAAATCACCCTCACACTCATTCTGTTGTCACAACAACCACTCCATCTTGATGCTATTGTCagtttttctcctttttcttctCCTACCTCATTCCTCTCTCGCCGTTCGACCTATTCACTCCGATCCGTTCGAATTTCAACTTGCCAACTCCACCGATTCCAATGTCTCCCTCTCCACACCTCGACAAGGTTCCTTCGCTGACATCATTGATCGTGCTCTTCAGCATGAATTCACCGACACCGATCAAAATGAAGTGCCTGATGCGGGAGGTTTCAACAACAGTGTAGCAGAACAACAGGCTGTTCTAGAGACTGTGGCCAGAGTCACGCCAAACAAGAATGACACTAAAGATGAAAAGTCATTTCAGCTCCATCATGTATTCAATAGAGGCGAGGACACCCCAATGTTAATAGATCGCAAGGACAATGTATTTATCATTTCTAACTTTAAATCTAAGTATCCAGTGCTGCAGCTAGATTTACGGTTGATTTCAGACTTGGTCATTGCTATTGTTTCGGCAACTTGTGGTGGTGTTGCATTTGCTTTTTCTGGACAACCGGTCATTACTGGATATCTTCTAGCTGGCTCCATTGTTGGACCTGGAGGCTTTAACTTCATCAATGAAATGGTGCAGGTGGAAACAGTGGCTCAATTTGGTGTAATATTTATTCTCTTTGCATTGGGCCTCGAGTTTTCCATGACAAAGCTTCGAGTTGTTCGCTCTGTTGCTGTTCTTGGAGGCTTACTtcaaatttttctatttatgtgCATGTGTGGTTTTACTGTATCGTTATGTGGTGGTAAAGCTTCAGAAGGGATTTTTGTTGGTGCTTTCCTTTCTATGTCTTCAACAGCAGTGGTCTTGAAGTTTTTGATGGAAAAGAATAATACTAATGCCCTTCATGGCCAAGTCACAATTGGGACCCTTATTTTACAGGATTGTGCTGTTGGATTGCTCTTTGCATTGCTTCCTGTTTTGGGTGGCACCTCAGGTGTTTTTCAAGGAGTGTTATCAATGACAAAGCTGTTGGTGACATTGATTGCATTTCTCTCTATTCTGTCAATATTGTCTCGCACTTGCCTTCCGTGGTTGCTTAAACTGATGATAAGCCTATCATCACAGACAAATGAACTCTATCAGCTGGCGTCTGTTGCGTTCTGCTTGCTTGTAGCCTGGTGTAGTGATAAGCTGGGATTAAGTCTAGAACTAGGTGCCTTTGCTGCTGGAGTGATGATTGCAACCACTGATCTGGCTCAACATACACTAGAGCAAatTGAACCTATTTGCAATCTTTTCGCTGCTCTTTTCCTTTCCAGCATTGGAATGCTGATTCATGTTCATTTTCTTTGGAACCATGTTGATATTTTGGTAGCATCAGTTATTTTAGTGATTGTTATAAAAACAATCATAATTGCTTCAGTTGTGAAAGGATTTGGTTATAATAACAAGACTTCAGTACTTGTAGGAATGTCCATGGCACAAATAGGAGAATTTGCTTTTGTTCTTCTCAGTCGTGCTTCAAATCTTCATCTAGTTGAGGGTAAACTATATCTGCTGCTTCTTGGGACCACAGCTCTTAGTCTGGTGACAACTCCTTTACTTTTCAAGCTGATTCCTGCTGTAGTGCATCTTGGTGTGCTATTGAGGTGGTTTTCTCCTGACAGTGCAGTAGAGATTGGATATAAGGTAGACAACCTCCTTCGCTCAGATAGTGCTAAGCAGCGGATAGTTTTGATGGACAAAGAAGCCCGTGATTGTTAA 1773 0.4123 MLTPKSPSHSFCCHNNHSILMLLSVFLLFLLLPHSSLAVRPIHSDPFEFQLANSTDSNVSLSTPRQGSFADIIDRALQHEFTDTDQNEVPDAGGFNNSVAEQQAVLETVARVTPNKNDTKDEKSFQLHHVFNRGEDTPMLIDRKDNVFIISNFKSKYPVLQLDLRLISDLVIAIVSATCGGVAFAFSGQPVITGYLLAGSIVGPGGFNFINEMVQVETVAQFGVIFILFALGLEFSMTKLRVVRSVAVLGGLLQIFLFMCMCGFTVSLCGGKASEGIFVGAFLSMSSTAVVLKFLMEKNNTNALHGQVTIGTLILQDCAVGLLFALLPVLGGTSGVFQGVLSMTKLLVTLIAFLSILSILSRTCLPWLLKLMISLSSQTNELYQLASVAFCLLVAWCSDKLGLSLELGAFAAGVMIATTDLAQHTLEQIEPICNLFAALFLSSIGMLIHVHFLWNHVDILVASVILVIVIKTIIIASVVKGFGYNNKTSVLVGMSMAQIGEFAFVLLSRASNLHLVEGKLYLLLLGTTALSLVTTPLLFKLIPAVVHLGVLLRWFSPDSAVEIGYKVDNLLRSDSAKQRIVLMDKEARDC 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00522 590 Gene3D - 164 547 IPR038770 -
Tsu01g00522 590 PANTHER K(+) EFFLUX ANTIPORTER 6 20 589 - -
Tsu01g00522 590 PANTHER POTASSIUM/PROTON ANTIPORTER-RELATED 20 589 IPR045158 GO:0015386|GO:0071805|GO:1902600
Tsu01g00522 590 Pfam Sodium/hydrogen exchanger family 171 540 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g00522 Tsu-Chr1 4589780 4597376 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g00522 64 588 Antiporters AT5G11800 79.473 0.0 837
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g00522 - - gmx:100811030 949.118