Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00512 ATGGGTATCTGCATATCCGTTGCATCTTCAGAGATTCATGGAATCCCTCAAGTTCATGATGAGAATATCATGATATTTGAAACAAGCAAGATTCAATATGAGACTCAAAGACTTTGCTCTATTTACTCTAAACAAGGTACTAAAGGTCTCAACCAAGATGCTGCCTCTCTTTACAAGGGTTATGGGATTGAAGATGGAGCATTTTGTGGTGTTTATGATGGACATGGAAGGAATGGACATATAGTAAGCAAAATAGTAAACAATAGTTTACCTTCTCTCATATTGAACCAAAAGAATGCTATTGAGGAGATTAATGGTGTTGACAACAAACAATACCAATTTTCAAAATACTTTCTAAATATGAAAGAAGCTATTCTTGGTGCTTTCAAGGTGATGGATGAGGAAGTGAAGTTACAAGAGAATCTTGATTGTTCTTGTAGTGGAACTACTGCTGTAGTTGTCATAAGACAGGGTGAAGGACTTGTCATAGCTAATTTGGGTGACTCAAGAGCAATCTTAGGGACAATTCATGATGCAAAACTCAAAGCTATTCAATTGACTACAGATTTGAAGCCTGGATTACCTTGCGAAGCAAAGAGAATAAGGAGTTGCAACGGTTGTGTATATGCGCTGAAGGAAGAACCACATGTCCAACGAGTATGGTTGCCCAACGAGAACTACCCGGGTCTAGCCATGTCTAGAGCTTTTGGAGATTTCATACTCAAAGACCGTGGTGTTATTGCTATTCCAGATATTTTCTATCACCCTTTAACATCAAGTGACCAATTTATTGTTCTTGCAAGTGATGGGgTGTGGGATGTACTAAGTAATGAGGAGGTTGCATCAATTGTGTGGATGATAGGAAGTGAAGAGGCGGCTGCAAAGGCAGTGGTGGAAGCAGCCACAGCTGCGTGGGCAAAGAAGTATCCTTCATCTAGGGTAGATGACTGTACAGTGGTTTGCCTTTTCCTGCAGAAGAGACCACAAAACTTGGGATATATGGAAAAGTGA 1011 0.3996 MGICISVASSEIHGIPQVHDENIMIFETSKIQYETQRLCSIYSKQGTKGLNQDAASLYKGYGIEDGAFCGVYDGHGRNGHIVSKIVNNSLPSLILNQKNAIEEINGVDNKQYQFSKYFLNMKEAILGAFKVMDEEVKLQENLDCSCSGTTAVVVIRQGEGLVIANLGDSRAILGTIHDAKLKAIQLTTDLKPGLPCEAKRIRSCNGCVYALKEEPHVQRVWLPNENYPGLAMSRAFGDFILKDRGVIAIPDIFYHPLTSSDQFIVLASDGVWDVLSNEEVASIVWMIGSEEAAAKAVVEAATAAWAKKYPSSRVDDCTVVCLFLQKRPQNLGYMEK 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00512 336 SUPERFAMILY PP2C-like 22 326 IPR036457 -
Tsu01g00512 336 Gene3D - 20 327 IPR036457 -
Tsu01g00512 336 PANTHER ALPHABET, ISOFORM E-RELATED 1 329 - -
Tsu01g00512 336 CDD PP2Cc 37 285 IPR001932 -
Tsu01g00512 336 PANTHER PROTEIN PHOSPHATASE 2C 72-RELATED 1 329 - -
Tsu01g00512 336 Pfam Protein phosphatase 2C 64 302 IPR001932 -
Tsu01g00512 336 ProSiteProfiles PPM-type phosphatase domain profile. 38 324 IPR001932 -
Tsu01g00512 336 SMART PP2C_4 28 322 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g00512 Tsu-Chr1 4477849 4479641 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g00512 1 329 PP2C-type Phosphatase Gene Family AT5G26010 54.303 8.91e-109 318
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g00512 - - aip:107605550 457.218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g00512 01 4477849 4479641 Tsu01g00512 01 4477849 4479641 ECH