Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00486 ATGTCCCTACCTTTTACAGATCGTAACCGTCGTCGCAACCCAAAACCACATCAAAATCCCGTTCCCGATGCAAAACGCGATGACGTTGACGGTGGATTCGACGGTTCATCATTCACCGGTGCCGTATTCAATCTCTCAACAACAATTATTGGTGCCGGAATCATGGCTCTTCCTGCTGCCGTTAAACAACTCGGATTGATTCCTGGATCAATCATGATTATTCTCTGTGCTATTTTAACAGAGTTTTCCATTGTTACGCTCTTGAAATTCACACGTGTGTCTAAAACGACGACGTATTCTGGTGTTGTGAGGGATTCTTTTGGTGGCATTGGTCGATTTCTTTTGTTGCTTTCTATCATCTTCAATAATATGGGAATGCTTATTGCCTACATGGTCATTAtcgGTGATGTATTTTCGGGAACGTGGTCGGAAGGAGTCCACTTTTCAGGAGTTTTAGAAGAATGGTTTGGTCAGCAATGGTGGTCAACGCGTCCTATCTTGTTGTTGCTCACAACGCTTTTTGTTTTTGCGCCTCTCACATCTTTCAGACGTGTAGATTCACTGAGATACACATCAGCATTATCAGTGGGATTGGCTATTGTTTTTGTGGTGATAACAGCAGGTGTTGCAATTGTTAAGTTTGCCAATGGAAGCATTGGGGTGCCAAACTTAATGCCCAAAGTCACTAGCCAAGAATCCTTTTGGAAACTCTTCACTACTGTCCCTATTTTAGTCACTGCTTACATCTGTCATCATAATGTGCATCCTATAGAGAATGAACTTAAAGATCCATCCCATATGAATGCAATAGTTCGGACATCACTTTTACTATGCGCATCCGTGTACATAGCAACAAGCATTTTTGGAATTTTATTATTTGGAGACAACATACAAGATGATGTACTTGCAAATTTTGATGGAGATCTTGGAGTTCCTTATGGTACATTTCTTAATGATGTAGTTAGAGTGAGTTATGGATTTCACCTAATCTTAGTGTTCCCAATTGTGTTTTTCTCCCTTAGACTCAACCTAGATGGTCTTTTGTTTCCACATGCCATTCCTCTTGCCTTTGACAACAAAAGATTCTGTTTTGTGACAATAATTATCATGGCTTCTGTTTTTGTTGGAGCTAATTATGTTCCTAGTATTTGGTATGCCTTCCAATTCACAGGTGCTACAACTACCATTTCTGTTGGTTACATTTTTCCAGCTGCCATTGCTCTTAAGGACAATCGTGGGGTTGCAACAAAAAAAGACAAGTTGTTATCTttgttaattataattttggctGTCTCATGTAGCACTTTAGCCATCTTTAGTGACTTGTATTATAGCACTTTCAGTAAAAAAACAACATTACATGAAGCTTAA 1371 0.3902 MSLPFTDRNRRRNPKPHQNPVPDAKRDDVDGGFDGSSFTGAVFNLSTTIIGAGIMALPAAVKQLGLIPGSIMIILCAILTEFSIVTLLKFTRVSKTTTYSGVVRDSFGGIGRFLLLLSIIFNNMGMLIAYMVIIGDVFSGTWSEGVHFSGVLEEWFGQQWWSTRPILLLLTTLFVFAPLTSFRRVDSLRYTSALSVGLAIVFVVITAGVAIVKFANGSIGVPNLMPKVTSQESFWKLFTTVPILVTAYICHHNVHPIENELKDPSHMNAIVRTSLLLCASVYIATSIFGILLFGDNIQDDVLANFDGDLGVPYGTFLNDVVRVSYGFHLILVFPIVFFSLRLNLDGLLFPHAIPLAFDNKRFCFVTIIIMASVFVGANYVPSIWYAFQFTGATTTISVGYIFPAAIALKDNRGVATKKDKLLSLLIIILAVSCSTLAIFSDLYYSTFSKKTTLHEA 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00486 456 PANTHER AMINO ACID TRANSPORTER 15 449 - -
Tsu01g00486 456 MobiDBLite consensus disorder prediction 1 28 - -
Tsu01g00486 456 PANTHER AMINO ACID TRANSPORTER AVT6A 15 449 - -
Tsu01g00486 456 MobiDBLite consensus disorder prediction 8 28 - -
Tsu01g00486 456 Pfam Transmembrane amino acid transporter protein 35 437 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g00486 Tsu-Chr1 4215330 4219520 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g00486 11 450 Amino Acid or Auxin Permease AAAP Family AT3G30390 55.157 1.01e-175 498
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g00486 K14207 - gmx:100814034 667.537