Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00467 ATGGCATTAGTGATGATTCCTCAAGAAAATGATCATCAAGATGCAACAATTATCAAACTTGAATCAGCTTATTCTGATTTAGAATCACTTcttaaatcaacaaaacaaatggAACAAAACATAGAAACAATGGAAACAAGGTTTGATCTTTTACAAGGATCACTCACAACAGCTACAAGAAGAATACACCCTTTACAATCTTTATCCATGTCAAGAAAAGCACTTGATACAAGAATCAATAGAGCTATTTCTCCTGCTATAGCTCTTCTCGAAACATTCAAACTCGCCGAATCTCTTCAAAATAAACTCCTTAACCTTGCTTCGAAACTATCAACCGAAAAAACACATCAGAAGAGGCTTGAGAAGCTTTTAGATTACATGGATTGTGTTGATCAGTTGAATGAAGCTATTAATTCTATATGTCAAGTTGTTGAGCCAGTGATTATGAGGTTACAAGAAGTTGTTGAGTTTATAAGTAGAACAAAAGCTGCTGATCAATATAGAACACAAAGGTTAAGAGAAGCACTTATAACTCTTAAAGCACTTTATGAAACTGAGGTTGATGAAATGAGATTTGAAGGGTTGTTGGATCAAGCTTTGCTTAATATGCAAGATGAATTTGAGGCTCTTTTGCTTAAATTGAAGCATAGGAAGTTAGGTGATTTGTCACATATGCaaaatgatgatggtgatgaaagTGATGATCATTTGGATGTTAGCTTTGAATTGGGATCTGAGTTGGAAATTGAAGTCTTGAGAAGAATTTCAAATATTCTTGCTGCTAATGATTGCTTGGATATATGCATTGACATCTATGTTAAGGTAAGATACAAAAGGGCTGCAAAAGCTTTAATGAAGTTAAACCCTGATTACCTAAGAACATACACACCAGAAGGAATCGATGAAATGGAGTGGGAAAACTTAGAAACATCGATAACCCTATGGACACAACACTTTGAAGTTGCAACAAAGAAGGTTCTTTTATCAGAAAAGAAACTCTGCGAAAGCGTTCTAGGCGAAATCATAGACGGAATAATCCATCCAGAATGCTTCGTGAAAATATCAGACAAGATCATGGCCGTGTTCTTTCGATTCGGAGAAGGAGTAGCCAGAAGCAACAAAGAGCCACAAAAACTCTTCAAACTATTAGACATGTTTGAGTCATTGGAGAAACTCAAACCTCATGTACTCGAAATCTTTGATGGTGAGTCCGGAGAGGATATCTGTGTGCGGTTTCGTGAACTTGAGAAGCTAATAATTGATGCATCAAGCAAAGTTTTTTGGGAATTTGGATTGCAAATCGAAGGAAATGTCGATGGTTTTCTTCCGCCTCCACAAGATGGTTCTGTTCCAAAAATAGTAAGATATGCTGTCAACTATCTCAAGTACTTATCCACAGAAAATTACAGAACAACAATGGCTAAGGTTCTAAGAACGGAACAAACATGGAAAACCGAGTTGATGCAATCGTCAAAACAAGAAACAGACAAGGATTTATTGAACCATGCCATTTGTAATGTAATGGAAGCACTTCAAAGAAACATCGAATCCAAACGTTTGAGTTGTAAGGACAGGATTTTGGTGAATATCTTCATGATGAACACATATTGGTATATGTATATGAGAACAAAGAACACAGAACTTGGTGATTTGTTAGGTGAGAAATACatcaaagaaaattacaaaGCAGTGGCAGAAGAATCAGCTTACTTGTATCAGAAGCAAGCTTGGTTAGTTTTGGTTAAAATTTTGGAACATGATATCGATTTAATGGAACAAAAACAAGGGAAAGAAAAAAGCATTGGAAGGTTAGTGAATGAAAAGTTTGAGACATTTTTTAAGTGTTTAAGTGAGGTTTGTGAGAGGCATAGAAGTTTTTATAGCATACCTGATGTTGATTTGAAGGAACAAATGAGGGATTCAACAGTGAAACTTGTTGTGCCAGTTTATGCTGAGTTTTTGGAATCTTATTCAGGATTGTTGCAAAGGAAAGTTTATCCAAGTCCTCAAAGGTTACAAGGGTTGATTGGTAAAGCTTTTGGTTCTAATCATGATTGgaatttgaatggtggaagaaATTCTGGTTCTTTGGAAACTGATATTAGAAAATCTAGATGA 2118 0.3442 MALVMIPQENDHQDATIIKLESAYSDLESLLKSTKQMEQNIETMETRFDLLQGSLTTATRRIHPLQSLSMSRKALDTRINRAISPAIALLETFKLAESLQNKLLNLASKLSTEKTHQKRLEKLLDYMDCVDQLNEAINSICQVVEPVIMRLQEVVEFISRTKAADQYRTQRLREALITLKALYETEVDEMRFEGLLDQALLNMQDEFEALLLKLKHRKLGDLSHMQNDDGDESDDHLDVSFELGSELEIEVLRRISNILAANDCLDICIDIYVKVRYKRAAKALMKLNPDYLRTYTPEGIDEMEWENLETSITLWTQHFEVATKKVLLSEKKLCESVLGEIIDGIIHPECFVKISDKIMAVFFRFGEGVARSNKEPQKLFKLLDMFESLEKLKPHVLEIFDGESGEDICVRFRELEKLIIDASSKVFWEFGLQIEGNVDGFLPPPQDGSVPKIVRYAVNYLKYLSTENYRTTMAKVLRTEQTWKTELMQSSKQETDKDLLNHAICNVMEALQRNIESKRLSCKDRILVNIFMMNTYWYMYMRTKNTELGDLLGEKYIKENYKAVAEESAYLYQKQAWLVLVKILEHDIDLMEQKQGKEKSIGRLVNEKFETFFKCLSEVCERHRSFYSIPDVDLKEQMRDSTVKLVVPVYAEFLESYSGLLQRKVYPSPQRLQGLIGKAFGSNHDWNLNGGRNSGSLETDIRKSR 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00467 705 PANTHER OS08G0519900 PROTEIN 13 680 - -
Tsu01g00467 705 SUPERFAMILY Cullin repeat-like 124 678 IPR016159 -
Tsu01g00467 705 Coils Coil 27 47 - -
Tsu01g00467 705 Gene3D Exocyst complex component Exo70 160 686 - -
Tsu01g00467 705 Pfam Exo70 exocyst complex subunit 315 674 IPR046364 GO:0000145|GO:0005546|GO:0006887
Tsu01g00467 705 PANTHER EXOCYST COMPLEX PROTEIN EXO70 13 680 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g00467 Tsu-Chr1 3993757 3996446 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g00467 9 668 EXO70 exocyst subunit family AT4G31540 27.893 7.70e-72 245
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g00467 - - aip:107605596 1007.67