Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00371 ATGTTTCTCACCAACAACAGAATCATCATCATATGGCCTGGCCAGTGGGCTAATTTACCTCCTGAGTTGCTATTAGACATAATTAAAAGGGTGGAAGCTGGTGAAACCTCGTGGTCATGTCGTCAGCACTTGAACTATGTGGACTATCATGTGGATATCAAATCTATTAAGAAGAAATCTTCATTAACATTAAAGTTGGTAGTTTTAATGTTAGCTTCTATTTATGCAATATATATTTGCTCAATTAATTTAGAGCAACCCATGGTTGATCTCATTCGCACAAGCACTAAGTTGTTGGAACTAAGATCAATCACAAACCATTCATGTCATCCTTCTCGTGTCGAAGAATTCGATCTCCCCAACTTACATTATCCGCATCCGAAAACTTTCAACAGGGAGGAATGTGGTTGCAATCCTGTGCGATATTTTTGCATCATATCAATGCAACGATCTGGGAGTGGATGGTTTGAGACACTTATGAATAGTCACATTAATATAAGTTCCAATGGAGAGATATTTTCTGTAGCTAAAAGAAGGGAAAATGTTTCATCAATTTTGAAGACAATGGATAAAGTGTACAATCTTGATTTGTTTACTAGTGCTTCCAAGAATCAGTGCAATGCAGCAGTGGGATTCAAGTGGATGCTTAATCAGgGTTTGATGGAGCATCATAAGGAGATAGAAGAATACTTCCAAAGAAAAGGAGTTTCTGCAATATTCCTTTTAAGAAGGAATTTCCTACGTAGAGTAGTATCTGTGTTAGCAAATTCCTATGACAAATATGCCAAACCACTCAATGGAACCCACAAATCTCATGTCCACTCCACAATAGAGGCTGAAATTCTTGCTAAATACAAGCCACAAATCAATACAACATTACTAATGGTAGAGCTAAAGCAAACAGAGGAGACATCTGCAAAAGCCATTGAATACTTTAAGAACACTCGCTACATTGTTCTCTATTATGAGGATCTTCTCAAAAATCGAACGAAACTGAAGGATGTTCAAGAATTTCTAAGATTGCCATATAGAGATTTGCAAAGCCGTCAGTTTAAGATTCATACTGCACCATTGTCAAAGCAAATTGAAAATTGGGATGAAGTACAAGAAGCACTAAAAGGGACCCCATATCAGAGTTTTCTATACACAGACTAA 1155 0.3697 MFLTNNRIIIIWPGQWANLPPELLLDIIKRVEAGETSWSCRQHLNYVDYHVDIKSIKKKSSLTLKLVVLMLASIYAIYICSINLEQPMVDLIRTSTKLLELRSITNHSCHPSRVEEFDLPNLHYPHPKTFNREECGCNPVRYFCIISMQRSGSGWFETLMNSHINISSNGEIFSVAKRRENVSSILKTMDKVYNLDLFTSASKNQCNAAVGFKWMLNQGLMEHHKEIEEYFQRKGVSAIFLLRRNFLRRVVSVLANSYDKYAKPLNGTHKSHVHSTIEAEILAKYKPQINTTLLMVELKQTEETSAKAIEYFKNTRYIVLYYEDLLKNRTKLKDVQEFLRLPYRDLQSRQFKIHTAPLSKQIENWDEVQEALKGTPYQSFLYTD 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00371 384 Pfam Sulfotransferase domain 144 344 IPR000863 GO:0008146
Tsu01g00371 384 PANTHER PROTEIN, PUTATIVE, EXPRESSED-RELATED 51 384 - -
Tsu01g00371 384 Gene3D - 140 371 IPR027417 -
Tsu01g00371 384 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 137 350 IPR027417 -
Tsu01g00371 384 PANTHER SULFOTRANSFERASE 51 384 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g00371 Tsu-Chr1 3159090 3162748 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g00371 8 44 TUB Transcription Factor Family AT1G76900 51.351 1.33e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g00371 - - gmx:100819406 501.516
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g00371 01 3159090 3162748 Tsu05g00639 05 5313253 5317776 ECH
Tsu01g00371 01 3159090 3162748 Tsu02g03397 02 38010543 38016558 ECH
Tsu01g00371 01 3159090 3162748 Tsu01g00371 01 3159090 3162748 ECH