Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00351 atgcaaactttattttcacCTTTGTTAGAACCAGACCTATCCTTAAACATAAGTCCACCTTTTATTTCAGATTCTGAAGTCAAAGGAATGAAAACTTATGATAATAAAGGATTAACAAAAGCACtttataatgataatatatGTTCTATATCAACTTCTGATTCAGCTAGTAGTGAAAGTGAGTTAAGTCATGAAAATCCTTTTGTCTATCATCATCATGAGCCAACATTAAGATTAGGATTTGGAAACTCAGATTTGATGAATccacatcatcataatcatcatcttcatcgtcATCAAGTACAAGGTGTATCAAGAAACTTTAACCACCAACACTTCCAACCTCACATCTATGGTCGCGACTTCAAGCGAAATACTAGAGTTGTTAATGGTGTCAAAAGAAGTGTTAGAGCTCCAAGAATGAGATGGACTACAACTCTTCATTCTCATTTTGTTCATGCCGTTCAACTTCTCGGCGGTCATGAAAGAGCAACTCCAAAATCTGTGTTAGAACTAATGAATGTGAAGGATCTAACCCTAGCACACGTCAAGAGTCACTTACAGATGTATAGAACAGTGAAGACCACTGACAAATCAGGAGCagGTCATGGTATGGTACAGACACAAGGGATTAATAATATTGTTCCTTTGCATGGAGCTAATTCTTGTGAGAGACCAAATTTACCACAAGAGAGGACATCTTGGCAACCATCAAAAGAGACAAATACAAACAATACTGAAGAAAGATCCGAAAATGGTTTGGTGTATTCTCATTTCAAGGAAAATGATACCATGGTGAATAGGTTGGATTCTACCCAATTGTCACATACCAACTCCATGATTGATTTAGAATTCACACTTGGAAGGCCTAATTGGGAAAAAGACCAAGCTGAATCATCAAGAGAATTAGCTTTTCTCAAGTGTtaa 927 0.343 MQTLFSPLLEPDLSLNISPPFISDSEVKGMKTYDNKGLTKALYNDNICSISTSDSASSESELSHENPFVYHHHEPTLRLGFGNSDLMNPHHHNHHLHRHQVQGVSRNFNHQHFQPHIYGRDFKRNTRVVNGVKRSVRAPRMRWTTTLHSHFVHAVQLLGGHERATPKSVLELMNVKDLTLAHVKSHLQMYRTVKTTDKSGAGHGMVQTQGINNIVPLHGANSCERPNLPQERTSWQPSKETNTNNTEERSENGLVYSHFKENDTMVNRLDSTQLSHTNSMIDLEFTLGRPNWEKDQAESSRELAFLKC 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00351 308 Gene3D - 138 195 - -
Tsu01g00351 308 MobiDBLite consensus disorder prediction 223 255 - -
Tsu01g00351 308 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 139 192 IPR006447 GO:0003677
Tsu01g00351 308 Pfam Myb-like DNA-binding domain 140 191 IPR001005 -
Tsu01g00351 308 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 3 308 IPR044847 GO:0000976|GO:0006355|GO:0010158
Tsu01g00351 308 SUPERFAMILY Homeodomain-like 136 192 IPR009057 -
Tsu01g00351 308 MobiDBLite consensus disorder prediction 226 252 - -
Tsu01g00351 308 PANTHER MYB-LIKE DNA-BINDING DOMAIN, SHAQKYF CLASS PROTEIN 3 308 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g00351 Tsu-Chr1 2932844 2936868 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g00351 104 214 G2-like Transcription Factor Family AT5G42630 70.085 1.33e-52 170
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Tsu01g00351 Myb_DNA-binding 1.5e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g00351 - - gmx:106795723 341.273
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g00351 01 2932844 2936868 Tsu01g00351 01 2932844 2936868 ECH