Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00342 ATGGGGAACCAAGTATGCaaaagAGGAAAATTATCAAGGTGGAAGAAAAGGCCAACCAGTTTTGTTCATGATCATCAAACTTTGCCATCAGAGATTGGGATAAGAACTGTGAGTGTGGAAAAAGCTTGTAACTTCTCCACCACTTCAAATCTTTGCATCTCTATAGTTACTTGGAATATGAATGGTCAGGTTTCCTTTGAAGATTTAGCTGAGATGGTTGGTAGCAACCGCGATTTCGATCTTCTAGTTGTTGGCTTGCAAGAAGCTCCAAGAAAAAAAGTTGCAACTATGCTTTCAGCAGCTTTGGATGAAAGTCACACGCTGATAGGTAAAGTTACTATGCAATCTTTGCAGTTGTATTTGTTTGGACCAAAGAATGCAAGATCATTCATTGAAGAATTACTGGTGGACAAAGAATCTGTTGGAGGGTGTGGAGGAATAATTGGAAGAAAGAAAGGGGCTGTAGCAATCCGTATTAACTACAATGGCATAAGTTTAGTGTTCATCTCATGCCACCTTTCTGCTCATGGTCGCAATGTGGAAGAAAGAAATTATGAATGCAGGCATATATCACACTCTTTATTCTCCAAGATTTGGAGCCCATATTCTAGACCAGCCCACATGATTGTTTGGCTAGGAGATCTTAACTATAGGCTCCAAGGGATTGATACACATCCTGCCAGGAACCTAATAAACAAAGACCTTCACCATAAGCTGCATGGTAATGACCAGCTCTTGCAACAAGCTGGAGAAGGACAAATTTTCAATGGATTTTGTGAGGGGACATTGACATTCAAGCCAACATATAAGTATAATAAAGGAAGTAGCAATTATGACACAAGTCACAAGGTTAGAGTACCAGCATGGACAGATCGTATATTATTCAAGATAGAAGACACATACAACGTGGAAGCAAATCTACATTCCTATGAGTCCTTAGATGAAATATACGGTTCAGATCATAAGCCAGTAAAGGCTCACATCTGCTTAAGACTTCTTCAACCTCAAACTCAATCCAATTAA 1023 0.393 MGNQVCKRGKLSRWKKRPTSFVHDHQTLPSEIGIRTVSVEKACNFSTTSNLCISIVTWNMNGQVSFEDLAEMVGSNRDFDLLVVGLQEAPRKKVATMLSAALDESHTLIGKVTMQSLQLYLFGPKNARSFIEELLVDKESVGGCGGIIGRKKGAVAIRINYNGISLVFISCHLSAHGRNVEERNYECRHISHSLFSKIWSPYSRPAHMIVWLGDLNYRLQGIDTHPARNLINKDLHHKLHGNDQLLQQAGEGQIFNGFCEGTLTFKPTYKYNKGSSNYDTSHKVRVPAWTDRILFKIEDTYNVEANLHSYESLDEIYGSDHKPVKAHICLRLLQPQTQSN 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00342 340 Gene3D Endonuclease/exonuclease/phosphatase 32 340 IPR036691 -
Tsu01g00342 340 PANTHER INOSITOL 5-PHOSPHATASE 17 337 - -
Tsu01g00342 340 Pfam Endonuclease/Exonuclease/phosphatase family 56 321 IPR005135 GO:0003824
Tsu01g00342 340 PANTHER LD06095P 17 337 - -
Tsu01g00342 340 SUPERFAMILY DNase I-like 41 332 IPR036691 -
Tsu01g00342 340 SMART i5p_5 49 336 IPR000300 GO:0016791|GO:0046856
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g00342 Tsu-Chr1 2804977 2808612 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g00342 34 332 Acyl Lipid Metabolism Gene Families AT2G43900 28.455 3.20e-33 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g00342 - - mtr:MTR_1g021730 564.688
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g00342 01 2804977 2808612 Tsu01g00342 01 2804977 2808612 ECH