Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00339 atgaagttcaaaataccaaaatcaaaaccaacacttttatttttcttttttctcaccCTCTTGTGTCTTCCCTTCCTTAATGCCTCAAGAACAATCATGAAAGATCAATTCAAAGAAGCACCTCAATTCTACAACTCACCATATTGTGCCTCCATCACTGAATCACAATCAGACACCGAACAAGACACAGACACTGATACATACTATATCTGCTCTGAGGAAGCAGTACATGTGGCAATGACATTAGACACAACATACATCCGAGGATCCATGGCTGCAATCCTCTCTGTCCTTCAACACACATCATGCCCAGAAAACATCATCTTTCACTTTGTTTGTTCTTCAAACATTTCACTTCTTCGCTCCACAATCTCAAAAACTTTCCCTTACCTTAAATTCCAAGTCTACAATTTCGATGAATCGATCGTTTCAGGACTAATCTCATCCTCGATTCGATCAGCACTCGATTGCCCTTTAAACTATGCAAGAAGCTATTTGGCAAATCTACTTCCATTATGTGTTAGAAAAATTGTTTACTTAGATTCAGACCTTATCTTAGTTGATGATATCATAAAACTTGCATCAACACCATTAACCGAAAAAAATGCAGTTTTAGCAGCACCAGAATATTGCAATGCAAATTTCACATATTACTTCACACCAACATTTTGGTCCAACCCATCTTTGTCTTTAACATTCGCGAATCGAAAAGCTTGTTACTTTAATACCGGGGTTATGGTAATCGATCTAGAAAAATGGCGCGAAGGCGACTACACAACAAAGATTGAAGAATGGATGGAATTACAAAAGAGGATAAGAATCTATGAACTTGGTTCATTGCCACCTTTTTTACTAGTTTTTGCAGGTGAAATTGTTCCTGTGGATCATAGATGGAATCAACATGGTCTCGGTGGCGATAATTTTCGAGGTCTTTGTAGAGAACTTCATCCTGGTCCAGTGAGTTTATTGCATTGGAGTGGAAAAGGTAAACCATGGGTTAGATTGGATGCTAATAGACCTTGTCCTTTGGATGCTCTTTGGGAACCTTATGATCTTTTGAAGACACCATTTTCTCTTGAATCTTGA 1086 0.3656 MKFKIPKSKPTLLFFFFLTLLCLPFLNASRTIMKDQFKEAPQFYNSPYCASITESQSDTEQDTDTDTYYICSEEAVHVAMTLDTTYIRGSMAAILSVLQHTSCPENIIFHFVCSSNISLLRSTISKTFPYLKFQVYNFDESIVSGLISSSIRSALDCPLNYARSYLANLLPLCVRKIVYLDSDLILVDDIIKLASTPLTEKNAVLAAPEYCNANFTYYFTPTFWSNPSLSLTFANRKACYFNTGVMVIDLEKWREGDYTTKIEEWMELQKRIRIYELGSLPPFLLVFAGEIVPVDHRWNQHGLGGDNFRGLCRELHPGPVSLLHWSGKGKPWVRLDANRPCPLDALWEPYDLLKTPFSLES 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00339 361 PANTHER GLYCOSYLTRANSFERASE 8 DOMAIN-CONTAINING PROTEIN 10 361 - -
Tsu01g00339 361 Pfam Glycosyl transferase family 8 77 334 IPR002495 GO:0016757
Tsu01g00339 361 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 77 341 IPR029044 -
Tsu01g00339 361 SUPERFAMILY Nucleotide-diphospho-sugar transferases 76 352 IPR029044 -
Tsu01g00339 361 PANTHER GALACTURONOSYLTRANSFERASE-LIKE 1-RELATED 10 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g00339 Tsu-Chr1 2781730 2783209 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g00339 12 359 Glycosyltransferase AT3G50760 68.091 1.19e-175 489
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g00339 K20893 - gmx:100818099 563.148
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g00339 01 2781730 2783209 Tsu01g00339 01 2781730 2783209 ECH
Tsu01g00339 01 2781730 2783209 Tsu07g00360 07 2702103 2703770 PCT