Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00337 ATGGAAGAAGTTTGCACACCTCTCAAACCTGATAGTAGATTAAAGCACCGTCCTTTGACCCCTCTTAGGCTTTTAAGGGGTGTGATATGTTTGGTTGTGTTTCTTTCTACAGCTTTCATTTGTATAGTATATCTTTCGCCTCTGGCAGTTGTAGGATTGCGACTGATCAGCGTCCGTTATAGTAGGAAGGCAGTATCGTTCTTCTTTGGTCTTTGGCTATCTATGTGGCCCTTTCTATTTGAAAAGATAAACCGAACTAAAGTTGTCTTTTCTGGGGATAGTATTCCGATGAGGGAACGTGTGTTACTTATCGCCAATCACAGAACTGAGGTCGATTGGATGTACTTGTGGGATCTTGCTCTTCGAAAGGGAAGACTAGGAAGTATAAAATATATCCTTAAGAGCAGCTTAATGAAACTACCGATTTTCGGTTGGGGATTTCACCTTCTGGAATTCATTGCAGTGGAGAGGAAGTGGGAGATAGATGAGCAAATATTGCAACAAAATCTTTCAACATTTCAGGATCCGAAAGATCCTTTGTGGCTATCTCTTTTTCCTGAAGGAACCGATTATACTGAACAGAAGTGTAAAAGTAGTAAAAAATTTGCTGCTGAAGCTGGGCTTCCTGTGCTGTCAAATGTATTACTTCCAAAAACGAAGGGGTTTCACACTTGCTTGGAAACTCTACGAGACTCATTGGATGCAGTTTATGACCTGACAATTGCATACAAGAATCAATGTCCTTCATTTCTAGACAATGTTTTTGGCCTTGATCCTTCAGAAGTACACCTGCATATTCGGCGTATTCCTATAGAGGAGATTCCAATTTCTGAAACTAAAGCTGATTCTTGGTTAATGGATGCATTTCAAATCAAGGACCAATTGCTTTCTGATTTCAAGGTTCAAGGCCATTTCCCTAGCCAACTAAATGAAGAGGAAATCTCAACCTTCAAGTGCCTAGTCACTTTTATCGTGATAATTTCTTTTACTGCCTTGTTTACTTATTTTACCTTGTTTTCTCACATCGGATTCAAGTTATATGTAGGTCTATCTTGTGCATATCTTTCTATTGCAACGCGcttcaaaattcaattgaagCCTTTAGCAAATTATGTCCACGCATTCTATAAcaacaagaaacaaaagaaTGCATAG 1155 0.3818 MEEVCTPLKPDSRLKHRPLTPLRLLRGVICLVVFLSTAFICIVYLSPLAVVGLRLISVRYSRKAVSFFFGLWLSMWPFLFEKINRTKVVFSGDSIPMRERVLLIANHRTEVDWMYLWDLALRKGRLGSIKYILKSSLMKLPIFGWGFHLLEFIAVERKWEIDEQILQQNLSTFQDPKDPLWLSLFPEGTDYTEQKCKSSKKFAAEAGLPVLSNVLLPKTKGFHTCLETLRDSLDAVYDLTIAYKNQCPSFLDNVFGLDPSEVHLHIRRIPIEEIPISETKADSWLMDAFQIKDQLLSDFKVQGHFPSQLNEEEISTFKCLVTFIVIISFTALFTYFTLFSHIGFKLYVGLSCAYLSIATRFKIQLKPLANYVHAFYNNKKQKNA 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00337 384 Pfam Acyltransferase C-terminus 255 325 IPR032098 -
Tsu01g00337 384 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 38 209 - -
Tsu01g00337 384 PANTHER 1-ACYL-SN-GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE 5-RELATED 3 373 - -
Tsu01g00337 384 CDD LPLAT_LCLAT1-like 77 267 - -
Tsu01g00337 384 SMART plsc_2 101 223 IPR002123 GO:0016746
Tsu01g00337 384 PANTHER 1-ACYLGLYCEROL-3-PHOSPHATE ACYLTRANSFERASE-RELATED 3 373 - -
Tsu01g00337 384 Pfam Acyltransferase 91 244 IPR002123 GO:0016746
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g00337 Tsu-Chr1 2755486 2759650 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g00337 3 367 Miscellaneous Gene Families AT1G75020 66.575 0.0 518
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g00337 K13513 - gmx:100808657 646.736
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g00337 01 2755486 2759650 Tsu05g00608 05 5016634 5021838 ECH
Tsu01g00337 01 2755486 2759650 Tsu01g00337 01 2755486 2759650 ECH