Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00324 ATGCCTCATCTTCTACTCTTGTTGATTTTTATCTTGCTGCTAGTGTTCATAGCAAGGATCACATACTCAATTATTTGGCTTCCATGGATAATTTCTCGTCACTTTAACAAACAAGGCATAAGGGGTCCTCCCTACCATCCGATTAAAGGAAATGCCGATGAGATCCAATCTATGTTCGCGGAAGTTCAATCCAAGCCAATGGATTTATGCCACGATATTGTTCAGCGTGTGTGTCCATTCTATCATAGGTGGACTTCTATGTACGGGAAAACTGTCCTCAGTTGGTACGGGTCGAGGCCCCGACTGATATTATCTGACCCGATTATTATTAAGGAGGCACTTTTGAAAACGGGTGAGTGGTTTGAGAAGATGGATCCGAATCCATTGTCGAAACAATTTTATGGAGAAGGAATTCTATTCTCAAAGGGAAGGAAGTGGACCATTTATAGATCAATTGCTAATAATGCTTTTAAAATGGAGAGGATTAAGTCTTGGATTCCTCAAATCATAGACACcacaaaattaatgttttacaTGTGGGAAGATGAGAACAGTGGCATTGAAGAATTTGAGATTGATGTGAATAAAGATCTCCAAAATCTTTCAGCTGACATCATATCTAGAGTTGCTTTTGGAAGTAGCTATGAAGAAGGGAAAGAGATTTTTGATTTACAAGATCAACATTGTCATCTTGCTAGTCTTGCTCAAAGAAGTGCTTATTTTCCTGGCTTAAGGTATATACCTACCAAGAataatagagaaagaaagagattAGAAAAGAAAACTCGAGAATTAATTCAAGTGTTGATTGAAGATAACCATAAAGCACAAAATAATTCAGAAAATTTGCTCACTTTGCTAATGTCTCCTCACAAATTTATCAACAATGAGACACAAAGGTTAGGAATGGATGAGATTATAGATAATTGTAAAAATTTCTATTTGGCAGGAAAGGAAACAAGTGCAAATTCAATAAGTTGGGCAATCCTACTTTTAGGGATGAATCAAGAATGGCAAAATAAGGCACGTGAGGAGGTACTTGCTGTTTTAGGACATCATACACCCCCAACTCCTGAAACAATAAGTGGCCTCAAATTAGTGAGCTTGGTAATTCAGGAAACACTTAGACTTTATCCTATAGCAGGGATATTGGTGAGGCAAGCAAGTAAAAGAGTTAACATTGGGAACATTGACATTCTTGCTGGCACACAATTATACATGTCTATAATTTCACTTCATCATGATACTAAAATATGGGGAGAAGATGCTCTTGAATTCGATCCTATGAGGTTTACAAAGCCCCATAAGCATTCATATTCTTCATATTTCCCATTTGGATTTGGCCCCAACTATTGTGTAGGTCAAAATTTAGCCATGGTTGAAATCAAGATTGTTCTTGCCATGATTCTGCAGAGATATTCTTTTTATGTTTCACCAACATATGTTCATGGACCAATGTTGGTGATGACTGTGTCACCTCAATATGGCATGCAAATTGTCTTTAAAAGACTATGA 1515 0.3644 MPHLLLLLIFILLLVFIARITYSIIWLPWIISRHFNKQGIRGPPYHPIKGNADEIQSMFAEVQSKPMDLCHDIVQRVCPFYHRWTSMYGKTVLSWYGSRPRLILSDPIIIKEALLKTGEWFEKMDPNPLSKQFYGEGILFSKGRKWTIYRSIANNAFKMERIKSWIPQIIDTTKLMFYMWEDENSGIEEFEIDVNKDLQNLSADIISRVAFGSSYEEGKEIFDLQDQHCHLASLAQRSAYFPGLRYIPTKNNRERKRLEKKTRELIQVLIEDNHKAQNNSENLLTLLMSPHKFINNETQRLGMDEIIDNCKNFYLAGKETSANSISWAILLLGMNQEWQNKAREEVLAVLGHHTPPTPETISGLKLVSLVIQETLRLYPIAGILVRQASKRVNIGNIDILAGTQLYMSIISLHHDTKIWGEDALEFDPMRFTKPHKHSYSSYFPFGFGPNYCVGQNLAMVEIKIVLAMILQRYSFYVSPTYVHGPMLVMTVSPQYGMQIVFKRL 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00324 504 Gene3D Cytochrome P450 29 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g00324 504 PRINTS P450 superfamily signature 443 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g00324 504 PRINTS P450 superfamily signature 316 333 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g00324 504 PRINTS P450 superfamily signature 369 380 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g00324 504 PRINTS P450 superfamily signature 452 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g00324 504 PANTHER CYTOCHROME P450 FAMILY 709 PROTEIN 3 499 - -
Tsu01g00324 504 PRINTS E-class P450 group I signature 85 104 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g00324 504 PRINTS E-class P450 group I signature 201 219 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g00324 504 PRINTS E-class P450 group I signature 452 475 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g00324 504 PRINTS E-class P450 group I signature 305 322 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g00324 504 PRINTS E-class P450 group I signature 442 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g00324 504 PRINTS E-class P450 group I signature 325 351 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g00324 504 PRINTS E-class P450 group I signature 109 130 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g00324 504 PRINTS E-class P450 group I signature 368 386 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g00324 504 Pfam Cytochrome P450 82 479 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g00324 504 PANTHER CYTOCHROME P450 FAMILY MEMBER 3 499 - -
Tsu01g00324 504 SUPERFAMILY Cytochrome P450 38 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g00324 Tsu-Chr1 2645568 2648168 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g00324 22 504 Cytochrome P450 AT1G75130 48.148 1.20e-169 486
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g00324 - - mtr:MTR_1g022040 854.358
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g00324 01 2645568 2648168 Tsu01g00324 01 2645568 2648168 ECH