Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00314 ATGACAATATTGGCTTCTGGCTTTGTGTTTCTTGTACTCTTCTTTCTCACATTCAACCTTGCAAATTCTGACCCATTCTTAGGAGTAAACTATGGACAACTCGCCGACAACCTTCCACCACCATCCGCCACCGCAAAACTACTCCAAACAACCGCATTCGAAAAAGTCCGATTATACGGAACCGATCCCGCCATAATCAAAGCACTAGCCAACACCGGAATCGGAATCGTAATCGGAGCTGCAAACGGCGATATTCCATCACTCGCTTCCGATCCAAGTTTCGCCAAAACCTGGATTAACACCAACGTCATCCCTTACTATCCCGCTAGCAACATCATCCTCATCACCGTCGGAAACGAAGTTATAACTTCAAATGACACAAATCTTATTAACGGAATGTTACCGGCGATTCAGAACTTGCAAAATGCACTTGATGAAGCTTCTCTTAGTGGTAAAATTAAGGTTTCTACGGTTCATACTATGTCGGTTTTGTCGAATTCTGAACCTCCTTCTGCTGGAAGTTTTCATCCTGAATATAGTGCCGTTTTGAAGGGTTTGTTGTCGTTTAATAAAGATACTGGTTCTCCTTTTGCTATTAATCCTTATCCTTATTTTGCTTACAAAAGTGATCCTGGAAGAGCTGATAATTTGGCTTTTTGTCTCTTTCAACCTAATGCCGGCCGAGTTGACGCTAACACCAAACTCAATTACATGAATATGTTTGATGCTCAGGTGGATGCTGTTCGATCTGCATTAGATTCTATGGGTTTTAAGGAAGTTGAGATTGTGGTTGCGGAGACGGGGTGGCCCTATAAAGGAGATAATGACGAGGCTGGACCAAGTATTGAGAATGCAAAGGCGTACAACGGTAATCTGATTAAGCATCTACGATCCAAGGTTGGGACACCACTGATGCCAGGGAAATCAGTGGACACATATATCTTTGCTTTATATGATGAAGACTTGAAGCCTGGAGCTGGTTCTGAGAAATCCTTTGGGCTTTACAACCCTGATCAAACAATGATCTATGACGCTGGCCTCTCTAAGCAGCAAAGTACAACTCCTACTCCTACCAGTAGCCCCGTGGTCGCCCCGACTCCGGAAGTATCGAAAACTCCAGTGATTCCAGCACAAACAGGTCCAAGACAGAAAGGCCCTAGCCCAACGCCAAATAAAGCGGAATTCTTAAATGGACATGAAGCCAGCATTTTGCAATCATTAATCATGCTCACATATCTTATCTTATTGTTGTTCTAG 1257 0.4344 MTILASGFVFLVLFFLTFNLANSDPFLGVNYGQLADNLPPPSATAKLLQTTAFEKVRLYGTDPAIIKALANTGIGIVIGAANGDIPSLASDPSFAKTWINTNVIPYYPASNIILITVGNEVITSNDTNLINGMLPAIQNLQNALDEASLSGKIKVSTVHTMSVLSNSEPPSAGSFHPEYSAVLKGLLSFNKDTGSPFAINPYPYFAYKSDPGRADNLAFCLFQPNAGRVDANTKLNYMNMFDAQVDAVRSALDSMGFKEVEIVVAETGWPYKGDNDEAGPSIENAKAYNGNLIKHLRSKVGTPLMPGKSVDTYIFALYDEDLKPGAGSEKSFGLYNPDQTMIYDAGLSKQQSTTPTPTSSPVVAPTPEVSKTPVIPAQTGPRQKGPSPTPNKAEFLNGHEASILQSLIMLTYLILLLF 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00314 418 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 7 360 IPR044965 GO:0004553|GO:0005975
Tsu01g00314 418 Gene3D Glycosidases 26 354 - -
Tsu01g00314 418 MobiDBLite consensus disorder prediction 348 393 - -
Tsu01g00314 418 PANTHER GLYCOSYL HYDROLASE FAMILY 17 PROTEIN 7 360 - -
Tsu01g00314 418 MobiDBLite consensus disorder prediction 348 386 - -
Tsu01g00314 418 SUPERFAMILY (Trans)glycosidases 27 345 IPR017853 -
Tsu01g00314 418 Pfam Glycosyl hydrolases family 17 27 344 IPR000490 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g00314 Tsu-Chr1 2567647 2571980 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g00314 5 384 Glycoside Hydrolase AT5G42720 62.437 1.06e-176 498
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g00314 - - gmx:100802287 603.208
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g00314 01 2567647 2571980 Tsu01g00314 01 2567647 2571980 ECH