Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00312 ATGTTGGAAGACACACTCAAGTGGAGATCAGTCTACAAGCCTGAGAAAATCCGATGGGATGAGGTTGCAGAGGAAGGGGAGACAGGGAAAGTTTATAGAGCAAGTTTTCATGACAGACAAGGAAGGACTGTTCTTATTTTGAGACCTGGAATGCAGAACACTTCTTCATTGGACAATCAAATTAAGCATCTTGTGTATCTATTGGAAAATGCTATGCTTAATCTTCCACCAGGTCAAGAACAAATGGCTTGGTTGATAGACTTCACTGGCTGGTCAATTACCAACAATGTTCCCCTCAAATCAGCCAGAGAGACCATCAACATTCTACAGAATCACTATCCCGAGAGGCTTGGCATAGCATTTCTTTATAACCCTCCTCGAATTTTTGAAGCGTTTTGGAAGattGTGAAGTATTTCTTGGATAACAAGACATTTCAGAAGGTGAAATTTGTGTACCCTAAGAATAAAGATAGTGTAGAGCTCATGAAGTCTTATTTTGATGAGGAAAATCTTCCAAGTACACTAGGCGGAAAAAGCGTATTGAACTATAACCATCAGGAATTTTCCAAAATAATGGTTCAAGATGATTTGAAATGTGCAGACTTTTGGGGTTCTGATGATAAGCTCTCAAACCACAGGCATTGTTCAGCAGAGGTAGCTCCAGAACCAGTTTGCAATGAAACTCCAGCTACATGA 696 0.4009 MLEDTLKWRSVYKPEKIRWDEVAEEGETGKVYRASFHDRQGRTVLILRPGMQNTSSLDNQIKHLVYLLENAMLNLPPGQEQMAWLIDFTGWSITNNVPLKSARETINILQNHYPERLGIAFLYNPPRIFEAFWKIVKYFLDNKTFQKVKFVYPKNKDSVELMKSYFDEENLPSTLGGKSVLNYNHQEFSKIMVQDDLKCADFWGSDDKLSNHRHCSAEVAPEPVCNETPAT 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00312 231 PANTHER RANDOM SLUG PROTEIN 5-LIKE 1 230 - -
Tsu01g00312 231 CDD SEC14 37 178 IPR001251 -
Tsu01g00312 231 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 19 183 IPR001251 -
Tsu01g00312 231 Gene3D - 1 208 IPR036865 -
Tsu01g00312 231 Pfam CRAL/TRIO domain 28 177 IPR001251 -
Tsu01g00312 231 SMART sec14_4 25 180 IPR001251 -
Tsu01g00312 231 PANTHER GH16843P 1 230 - -
Tsu01g00312 231 SUPERFAMILY CRAL/TRIO domain 19 194 IPR036865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g00312 Tsu-Chr1 2544260 2546939 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g00312 85 172 Acyl Lipid Metabolism Gene Families AT1G55840 33.333 2.79e-06 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g00312 - - aprc:113847293 427.943
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g00312 01 2544260 2546939 Tsu01g00312 01 2544260 2546939 ECH