Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00297 ATGCTTCCCAATAACTGTGCTACAGCTCTGGAGATTCCAATTCCAAGTTGTTCTAAATTCAAGGTTCACCATTCAATATGCATAGAGCTTCAAGGACTCATTGATAGAATTTTGCATATTATATTATCCATTGAATCTGCAAGACCAAATTGTGCTTTAGCAGTTCAAGCATTGTGCTCTTTGCACTTCACTTTGGATAAAGCCAATTTAGTTATCAAACACTGTTCTGAGTCAAGTAAACTCTATCTGGTAGGTACTTTTCAACTTCAAGTAGGACAgtttaaaaataccaaaaactaA 300 0.3367 MLPNNCATALEIPIPSCSKFKVHHSICIELQGLIDRILHIILSIESARPNCALAVQALCSLHFTLDKANLVIKHCSESSKLYLVGTFQLQVGQFKNTKN 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00297 99 PANTHER U BOX DOMAIN-CONTAINING 26 88 - -
Tsu01g00297 99 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 5 26 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g00297 Tsu-Chr1 2429067 2431020 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g00297 20 86 U-box Gene Family AT4G36550 50.746 4.04e-19 79.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g00297 - - gmx:100796783 124.405
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g00297 01 2429067 2431020 Tsu01g00297 01 2429067 2431020 ECH