Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00251 ATGGACATGAACAATAAGAGAACTGTCGCTGCTGCCGTCGTAACGAGTCAACCCAACATTTCTACTACTATTAATGTTCAAGAAAACATGAATTGTGTCGATAAATGGGTGAACAATATCCATGAACAAAATGTGCAACATAGTATTGCCAATAGTGAACCTCACTTGGAAATGAAGTTTGAATCTGAGGCATCGGCTTatgatttttataattcatataGTAAAAGAATTGGATTTGGTATTCGTCGAGAATATGCAAATAAAAACAGAGTAGATGGAATTTTGACTTCAAGAAGATTCACATGTTTCAAAGAGGGCATACGAAGTGTTGACAAAAGATATGACTCGATAGCGGAGCCAAGAGCAGAAACTAGAACGGGGTGTCAAGCGCGTATGGCTATTTCACTTGATCGAAAGATAGGGAAATATAAGGTTGTTGACTTTATAGTTCAACATAACCACCCTCTTCAACCGTCAGAGCATGTTCATATGATCCGCTCTCATCGGCGCATATCTGAGGCACAAGCATCACAAATTGTGTTGGGAGATGAATCAGGATTAAGACCAAAAGATTTGCACGAATATATATCCAAACAAGTTGGTGGTATAGAGACAGTTGGTTTTACAAGAGAAGACCTTAAGAATTACCTTCAAACCAAAAGGAAGCAATCACAAAGTATGGTGAAGTGGGTGCATTGA 699 0.3805 MDMNNKRTVAAAVVTSQPNISTTINVQENMNCVDKWVNNIHEQNVQHSIANSEPHLEMKFESEASAYDFYNSYSKRIGFGIRREYANKNRVDGILTSRRFTCFKEGIRSVDKRYDSIAEPRAETRTGCQARMAISLDRKIGKYKVVDFIVQHNHPLQPSEHVHMIRSHRRISEAQASQIVLGDESGLRPKDLHEYISKQVGGIETVGFTREDLKNYLQTKRKQSQSMVKWVH 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00251 232 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 21 174 - -
Tsu01g00251 232 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 21 174 - -
Tsu01g00251 232 Pfam FAR1 DNA-binding domain 68 158 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g00251 Tsu-Chr1 2036910 2037839 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tsu01g00251 FAR1 6.4e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g00251 - - cam:101500125 328.561