Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00237 ATGGTGAAATCTAACTCATGTTTAAGGTTAATAtgcggtggtggtggtggtggtggtagtgGTGATGCTTCTAACAAACAAGTTATTTCACAGGTCAAGGATTCTAATGATAAACGTGGTTGGAGTTTCCGGAAGAGATCTGCAAGGCATCGTGTGCTTAGCAATACTGTGATAACAACAGAGACAACGTCTTCGGCAAATAAGGAGATTCCAGAATATACAAGTACTAATTTTCAATCTCCAGCTGAACCTAATGTCGTTGAAAAGATTTGTACGACAGATTTCTCTGATGAGAAACCTCAGTTATCCTCCAATGCATACTCAGAGATATCAGAAAAAATTGTCACTGAAGCTGAGGGTAAAGTGGATGTCAATCCACCAGAATCTGCGGTGATAATTGTCCAGACTTCCGTTAGAGCATATTTGGCTCAGAGAGCACTTCTGAAGAGTAAGAATGTAGTGAAGTTGCAAGCTGCTGTTCGAGGTCACTTGGTCAGAAGGCATGCTGTAGGAACATTACGATGTGTTCAAGCTATAGTTAAAATGCAGCTCCTTGTACGAGCACGGCATGCTCAGAAGTCACAACCAGATGGCAAAAATGATTACTCAAAAACTTCgGATAACGAGCATGACACGGACAAATCTAATTTGAAGCACACTTCTGTGGAAAAGCTTCTCAGCAATAAGTTTGCTCGTCAGCTTCTGGAATCAACACCGAAAGACAAACCTATCCATGTCAAATGTAATCCTTCTAAAGGCGATTCTGCTTGGAAATGGTTGGAGAGATGGATGTCTGTTCCAGCAAAAGATTCTGCAGAGAATAAAAAGCCAATCTGTGTGTCAGAACAACCAGATGAAACCAAAGATAGCACTCGTGTATCTCAATTGGAAACAGATACTCCATCTCAAGTTATTCTTCAGTTAGCTGATTCACCTATACCATCTGAGGATGAAGAGAAGACCGCTACTTATGAGGATAGCAACTCATACTTTGTAGCAAACCCCTCTACATCTTCTCTTATAAACGATAACTTGGAAGAGGCTCATCCCGAAAAGACGGTTTCAATTGGTGCTAAAGTATCCTCCAATAAAATTGAATCTTTTCAAAAGGAAATTTTGGATTCAAATGCAAGTGGTCCACAAGAATCTAGTTCTCCTCAGAATCCAGAAACGGACGATGAACAGCTCAAACATTCACGTGGTGCCAAAATAGCCTCCACGACAACTGATTCTTTTGAAAAGGAATTGTTCGGTTTTGCAAGTGTTCCACGGGAGCCTGGTTCTCCTCAGAGACCAGAAAGTGACAGTGAACAGTGCAAACAACCAGAAAAAGCATTTGCCTCAGACCAACTAGAGACCGAGGGAAAGAAAGTTGCATATGTATCAAGGAAGTTAAGCAATCCAGCATTTATTGCTGCTCAATCAAAATTTGAAGAGCTGAGTTCAAATGTGAATTTGGGTAGGCCAAGTTCTTCGTTCGATCAGGATGTATCAGTTGAATCACAAGCAGATACTGCTTATATATCAAAAGAGTTCATCCCATCTGAGAATTCTACTCCCTATCCTTCTAGAATTGGTGATCCTGAAACTgtactctctatttcttcaacTCTTGATTCACCTGACAGATCAGAGACTTTGGAAATCGAGCACGATGCCAAAGATTTAGTAGAAGGGATAGTTATTAATCCTGAAAACAATATTGGTTATGGTGTCGGAGCCAATACTCCAACTTCTAACTTACCTATCTCCGATTCTGATCGATTAGAAACTGTTAATGTCTCCAGTGAAAATATTGTTGATTCAGTGATACCTGAGAACTTCAAAGAGCCATCTGTTGAGCCTGAGGTAAATGCATCTGACCTGTTGAGGGAAAAAACCGAGACTGTTCTACCAGATTTCAAGTTGTCAGCTTCACCAGGAAGCTATATGACAATACCTGAGTCTCAAGGAACACCTTCAAGCCAGGTTTCGGTGAAacctaataaaataaacaagacTGGATCAAGCGGTAAACGTAGGGCACTGTCTATGGGTAACAAATCTCCTGCAAATTCAACCAACGATTCAGGCTCAAGAGTGTCTGTCGGTAACAAGTCTCCAGCGAACATGAATCATGATTCAGGTTCAAGAGGTAGTAGAGAACAATTGCCTAAGGATCAGCTGAACGGAAAGAGACGCAATTCATTTGGCTCAATAAAACCTGACCAGCCTGATCAAGAGCCTACTAGAGATAACAGTAGTAGCAATAATTCTCTTCCCCGTTTCATGCAAGCTACACAATCTGCTAGGGCCAAGATAAATGCTAATTCCTCTCCAAGATCAAGTCCAGATGTACATGACCCTGACGTTAACATTAAGAAGAGACATTCCTTGCCTGGTGCAACTGGTAAGCAGGGTTCTCCACGTGTCGAACAATCAATATCTCCAGCTCAGCAAGGCACAAAGGGCAATGGTTCAACCGAGAGAAAATGGCAGAGGTGA 2484 0.4034 MVKSNSCLRLICGGGGGGGSGDASNKQVISQVKDSNDKRGWSFRKRSARHRVLSNTVITTETTSSANKEIPEYTSTNFQSPAEPNVVEKICTTDFSDEKPQLSSNAYSEISEKIVTEAEGKVDVNPPESAVIIVQTSVRAYLAQRALLKSKNVVKLQAAVRGHLVRRHAVGTLRCVQAIVKMQLLVRARHAQKSQPDGKNDYSKTSDNEHDTDKSNLKHTSVEKLLSNKFARQLLESTPKDKPIHVKCNPSKGDSAWKWLERWMSVPAKDSAENKKPICVSEQPDETKDSTRVSQLETDTPSQVILQLADSPIPSEDEEKTATYEDSNSYFVANPSTSSLINDNLEEAHPEKTVSIGAKVSSNKIESFQKEILDSNASGPQESSSPQNPETDDEQLKHSRGAKIASTTTDSFEKELFGFASVPREPGSPQRPESDSEQCKQPEKAFASDQLETEGKKVAYVSRKLSNPAFIAAQSKFEELSSNVNLGRPSSSFDQDVSVESQADTAYISKEFIPSENSTPYPSRIGDPETVLSISSTLDSPDRSETLEIEHDAKDLVEGIVINPENNIGYGVGANTPTSNLPISDSDRLETVNVSSENIVDSVIPENFKEPSVEPEVNASDLLREKTETVLPDFKLSASPGSYMTIPESQGTPSSQVSVKPNKINKTGSSGKRRALSMGNKSPANSTNDSGSRVSVGNKSPANMNHDSGSRGSREQLPKDQLNGKRRNSFGSIKPDQPDQEPTRDNSSSNNSLPRFMQATQSARAKINANSSPRSSPDVHDPDVNIKKRHSLPGATGKQGSPRVEQSISPAQQGTKGNGSTERKWQR 827
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00237 827 MobiDBLite consensus disorder prediction 189 220 - -
Tsu01g00237 827 MobiDBLite consensus disorder prediction 436 451 - -
Tsu01g00237 827 MobiDBLite consensus disorder prediction 374 390 - -
Tsu01g00237 827 ProSiteProfiles IQ motif profile. 149 178 IPR000048 GO:0005515
Tsu01g00237 827 ProSiteProfiles IQ motif profile. 128 155 IPR000048 GO:0005515
Tsu01g00237 827 MobiDBLite consensus disorder prediction 311 330 - -
Tsu01g00237 827 MobiDBLite consensus disorder prediction 633 827 - -
Tsu01g00237 827 MobiDBLite consensus disorder prediction 642 711 - -
Tsu01g00237 827 MobiDBLite consensus disorder prediction 723 778 - -
Tsu01g00237 827 PANTHER IQ-DOMAIN 5-RELATED 1 826 - -
Tsu01g00237 827 PANTHER PROTEIN IQ-DOMAIN 32 1 826 - -
Tsu01g00237 827 SMART iq_5 126 148 IPR000048 GO:0005515
Tsu01g00237 827 SMART iq_5 149 170 IPR000048 GO:0005515
Tsu01g00237 827 Pfam IQ calmodulin-binding motif 151 168 IPR000048 GO:0005515
Tsu01g00237 827 MobiDBLite consensus disorder prediction 800 827 - -
Tsu01g00237 827 Gene3D - 127 175 - -
Tsu01g00237 827 MobiDBLite consensus disorder prediction 374 451 - -
Tsu01g00237 827 MobiDBLite consensus disorder prediction 275 293 - -
Tsu01g00237 827 MobiDBLite consensus disorder prediction 271 301 - -
Tsu01g00237 827 MobiDBLite consensus disorder prediction 192 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g00237 Tsu-Chr1 1888130 1893680 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g00237 461 827 IQD Protein Family AT1G19870 36.010 4.72e-36 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g00237 - - cam:101492650 1031.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g00237 01 1888130 1893680 Tsu01g00237 01 1888130 1893680 ECH