Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00222 ATGAAGGAATTGATCATAGCAACATTCAATGCAACAGCTGATGAACTCACCAACCAGATTAATAACTCAACACTTTACAAGGAATTGGCTACCAATGACATGACAAAACAAGCTATGGAAATTTGCAAAGAAGTCCTTGGTTATGCAGTTGATGATGTTCATGAATCAATTAATACATTGGATCAATTTGATCTAAGACAAACCATGACTAAGGTTCTAAACACATCATTGGAGCTAAGTAACAATGCTTTTGATATAATTAATGGAGTTGCAAACTTTGTGAAAAGCCTTAACTTAAGTTCTTTTACAAGTGAATTGAATAATAGGAAACTTTTGTCTTATGATGATGGTTTCCCAACATGGGCTAGTGAAAATCAAAGGAAACTTCTTGAAACCATTTCTAAACAGTACAAAAAACTAGAGGAAGAAAACCATTTCGaacttgttttgttttcatcatttgcTGTGTTGTTTCGATTGAATGGTGATAATGAGTATTCTCGTGATGTTGTGGTGTGGCCGGCgatggtgatgaatgatgatttCACGTGA 552 0.3207 MKELIIATFNATADELTNQINNSTLYKELATNDMTKQAMEICKEVLGYAVDDVHESINTLDQFDLRQTMTKVLNTSLELSNNAFDIINGVANFVKSLNLSSFTSELNNRKLLSYDDGFPTWASENQRKLLETISKQYKKLEEENHFELVLFSSFAVLFRLNGDNEYSRDVVVWPAMVMNDDFT 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00222 183 PANTHER PECTINESTERASE 65 132 - -
Tsu01g00222 183 PANTHER PECTINESTERASE 2 66 - -
Tsu01g00222 183 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 2 88 IPR035513 -
Tsu01g00222 183 Gene3D Invertase/pectin methylesterase inhibitor family protein 1 98 IPR035513 -
Tsu01g00222 183 PANTHER PECTINESTERASE 65 132 - -
Tsu01g00222 183 PANTHER PECTINESTERASE 2 66 - -
Tsu01g00222 183 Coils Coil 123 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g00222 Tsu-Chr1 1735485 1736408 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g00222 3 131 Carbohydrate Esterase AT3G05610 28.049 1.24e-16 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g00222 K01051 - gmx:100800194 168.703