Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00211 ATGgaaattcatcaacaacaagaaCAATCCATGAAGTtgagtagtagtagtaatagtaGTAAGTTCAAACGTATTTGTGTCTTTTGTGGCACTACCCCTGGCAAAAATCCAAGCTACCAACATGCTGCCATTGAATTTGCCAAACAactgGTGGAGAGGAACATTGACTTGGTATATGGAGGAGGAAGCATTGGTTTGATGGGTTTAATATCTCAACTTGTGTTTGGTGGAGGACGCCATGTCATAGGtttaataattattatgaCGAGTCAGATAATAGGGGAGAGTGTTGGAGAAGTTCAGACTGTAACGGACATGCACCAACGCAAGGCCGAAATGGCTCGACAAGCTGATGCTTTTATCGCCTTGCCAGGTGGATATGGCACTCTGGATGTACTAATGGAAGTGATCACCTGGGCTCAGCTAGGAATCCATGATAAACCAGTGGGATTGTTGAACGTGGATGGGTACTATAACTCGTTGCTGTCATTCATTGACAATGCTGTAAATGAAGGTTTCATAGCACCTGATGCTCGTCATATTATTGTGTCTGCCCATACTGCCCAAGATCTCATGTGCAAGCTTGAGGAATATGTCCCCAAGCACTGCGGTGTGGCCTCAAAGCAACGTTGGGAGAATGACAAGGAGTTAAAAAGCAATTAA 663 0.4103 MEIHQQQEQSMKLSSSSNSSKFKRICVFCGTTPGKNPSYQHAAIEFAKQLVERNIDLVYGGGSIGLMGLISQLVFGGGRHVIGLIIIMTSQIIGESVGEVQTVTDMHQRKAEMARQADAFIALPGGYGTLDVLMEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDNAVNEGFIAPDARHIIVSAHTAQDLMCKLEEYVPKHCGVASKQRWENDKELKSN 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00211 220 PANTHER CYTOKININ RIBOSIDE 5'-MONOPHOSPHATE PHOSPHORIBOHYDROLASE LOG1 14 215 - -
Tsu01g00211 220 PANTHER LOG FAMILY PROTEIN YJL055W 14 215 - -
Tsu01g00211 220 Pfam Possible lysine decarboxylase 67 194 IPR031100 -
Tsu01g00211 220 Gene3D - 11 197 - -
Tsu01g00211 220 TIGRFAM TIGR00730: TIGR00730 family protein 23 198 IPR005269 GO:0009691|GO:0016787
Tsu01g00211 220 SUPERFAMILY MCP/YpsA-like 21 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g00211 Tsu-Chr1 1623155 1625812 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g00211 K22522 - gmx:100814612 328.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g00211 01 1623155 1625812 Tsu07g00273 07 2074266 2076747 PCT