Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00184 ATGAAGGCAGCGAAAGCAGCAAATGCTCATGAATTCATTAGTAGAATGCCAGAAGGGTATATAACTGAGGTTGGAGAGAGAGGAGTGCAGTTACCAGGAGGACAAAAACAAAGGGTAGCAATTGCTAGAGCTAGTTTGAAAGATTCATCCATTCTTCTACTGGATGAAGCAACAAGTGTACTGGACACAGTATCAGAGAGGCTGGTCCAAGAGGCTTTTGATAAGCTTATGGAAGGTCGGACGACGATTTTGGTAGCTCACAGGCTCTCAACTGTTTGTGATGCAAACAGCATCGCAGAAATGGGAAGTCATGAGAGGCTTATGGCCAAACCCAGAAGCATCTATAAACAATTGGTTAGTCTACAGCAAGAAAAGTGTCAACAAGAAGAACATTAG 396 0.4318 MKAAKAANAHEFISRMPEGYITEVGERGVQLPGGQKQRVAIARASLKDSSILLLDEATSVLDTVSERLVQEAFDKLMEGRTTILVAHRLSTVCDANSIAEMGSHERLMAKPRSIYKQLVSLQQEKCQQEEH 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00184 131 PANTHER ABC TRANSPORTER B FAMILY MEMBER 13-RELATED 1 122 - -
Tsu01g00184 131 Pfam ABC transporter 11 59 IPR003439 GO:0005524
Tsu01g00184 131 Gene3D - 2 129 IPR027417 -
Tsu01g00184 131 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 1 122 IPR039421 -
Tsu01g00184 131 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 122 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g00184 Tsu-Chr1 1438059 1438454 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g00184 2 123 Calmodulin-binding Proteins AT2G36910 54.198 1.20e-42 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g00184 K05658 - gmx:100788391 210.305