Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00177 ATGGAAAGATTAATGCAGGTGAGACTAGTGacaatttttcttgttttattggGTAAAGTATCCAATATTGCAATTGCACAAAATACCACTGCAGCATTTCCTGCTGTGTTTGCATTTGGTGACTCAATCTATGACACTGGAAATAATAACAACCTTTTAACTCCATCTAAGTGTAATTTTCCTCCCTACGGAAAGGATTTCTATGGAGGACATGCTACCGGAAGATTCGGTAACGGCAGAGTTCTATCAGATTTGATAACCTCGGCTTTGGGAGTGAAAGAGACATTGCCAGCATTCTTGAATCCAGCTTTAACGGCACAAGACCTTCCTACCGGGATCTACCTCAATCAAAACGCCAAAGTTTATGTCTCATCAAACTCCATTGTATCTTTAGACTGA 399 0.386 MERLMQVRLVTIFLVLLGKVSNIAIAQNTTAAFPAVFAFGDSIYDTGNNNNLLTPSKCNFPPYGKDFYGGHATGRFGNGRVLSDLITSALGVKETLPAFLNPALTAQDLPTGIYLNQNAKVYVSSNSIVSLD 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00177 132 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 36 47 IPR008265 GO:0006629|GO:0016298
Tsu01g00177 132 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 1 114 - -
Tsu01g00177 132 Pfam GDSL-like Lipase/Acylhydrolase 36 95 IPR001087 GO:0016788
Tsu01g00177 132 PANTHER GDSL ESTERASE/LIPASE EXL3 1 114 - -
Tsu01g00177 132 Gene3D SGNH hydrolase 22 120 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g00177 Tsu-Chr1 1356810 1359453 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g00177 31 113 Pollen Coat Proteome AT1G75910 55.422 7.42e-24 92.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g00177 - - mtr:MTR_1g025910 184.111