Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00174 ATGACATGCTCTCGATGGTTTTGTTCTCTTCGTATTTCAGGTAGATCACGAAAAAAATCGGATGAGGAAGATGGCTTGCGTAGCAAGCCAAATGTAAATGAAGAATATCTCCAAACATTTAGAACAGAGTCTTATATGGAAATATGCAACAAAGCACAAGGGCAATTTGGGAAGAAAATTAGTACTAAAAGactctcttcatcttcttcaacatcTTCTCCTCTTCCTCCCATATGCTTGAATCTCACTGAGTCATTGCTCGAACCACGACAAGAAATCATCGCaaacttgaaacaaaatttcaagGTGCATAATCTTCTAGTGGACTATTTTGAAGCTAGCTTAGAAGCATGTCGTTATTGTGACACAATCCTTGAAGGAATCCACTCAACAAGACTTTCTTATACAAGAATCACAAGAGTTGTTAAGCTAAGCAAAAGGGTATTAATAAATTTCAATGATAGCACcaatgaacaaacaaaaaaggatATATACAAAGAGCTTGattcattttcatcaaaacTACAAAATAATGCTTTGTCCGTTATTAGCACAATGCAATTCCGCGACATTCACAATAAGTACATGGAACTTCTTCAAAGACTAacatcaaagagaaaaagaattaaaagaagATTAACATTGATAAGTGTTTGCAAGAAAGTTGGAGGAATTGCTCTTGTTACTTCACATGGTGCTATTCTTATTGCTTTATTAGTGGTTTCTTTACATAGTGTTGTTGGGTTGGTGGCTGCACCAACTATAGTTGGAGGTTTAGTTGGTTTGTtcataaatagaataaaaattaggataaagaaaagaacaaaGTGTGAAAGATTATGTGAACAACTTGATGCTGCTGCAAAAGGGGTTTTTATATTGATAAATGATTTGGATACTATGAGTAGGATGGTGAAGAGATTGAATGATGAAGTGGAACATAGGAAAATGATTGCTGATGTTTGTGTGAAGAATGTTGGTAGTAAATGTGAAATATTGAAACGTGTTATGAGTGAATTTAGTGATCATGATGGTAGCTTTTTGGAGCAGTTGGAAGAGCTTGAAGAACATGTTTACTTGTGCTTTCTCACTGTTAACAAATCCAGGAGACTTGTTATGCAACAAATTACAGAGAGATCACAACATTGA 1149 0.3142 MTCSRWFCSLRISGRSRKKSDEEDGLRSKPNVNEEYLQTFRTESYMEICNKAQGQFGKKISTKRLSSSSSTSSPLPPICLNLTESLLEPRQEIIANLKQNFKVHNLLVDYFEASLEACRYCDTILEGIHSTRLSYTRITRVVKLSKRVLINFNDSTNEQTKKDIYKELDSFSSKLQNNALSVISTMQFRDIHNKYMELLQRLTSKRKRIKRRLTLISVCKKVGGIALVTSHGAILIALLVVSLHSVVGLVAAPTIVGGLVGLFINRIKIRIKKRTKCERLCEQLDAAAKGVFILINDLDTMSRMVKRLNDEVEHRKMIADVCVKNVGSKCEILKRVMSEFSDHDGSFLEQLEELEEHVYLCFLTVNKSRRLVMQQITERSQH 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00174 382 Coils Coil 192 212 - -
Tsu01g00174 382 PANTHER UPF0496 PROTEIN 2-RELATED 15 381 - -
Tsu01g00174 382 PANTHER UPF0496 PROTEIN 3-RELATED 15 381 IPR007749 -
Tsu01g00174 382 Pfam Protein of unknown function (DUF677) 94 376 IPR007749 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g00174 Tsu-Chr1 1339709 1341132 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g00174 - - mtr:MTR_1g025960 541.962
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g00174 01 1339709 1341132 Tsu01g00174 01 1339709 1341132 ECH