Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00173 ATGGTTATGATGGTGTGCTTAACTTGTAGTATTAATGCAAGTACACTAAGTGTGAATCACTATAAACATACATGTCCTCAGGTAGAATCCATCGTGGCAGGTGCAGTACACAAAGCAACCTTGAATGACAAAACAGTACCATCTGCTCTGCTTCGCATGCATTTTCATGATTGCTTCATAAGGGGGTGTGATGGGTCTGTTCTGTTGAAATCAAAGGGAAAGAATAAAGCAGAAAAGGATGGACCTGCTAACATATCATTGCATGCATTCGATGTAATTGAGAAAGCTAAGAAAGCATTGGAAGCCATTTGTCCAGGGGTTGTATCTTGTGCTGATATTTTGGCTCTTGCTGCTAGAGATGCTGTCACTCTGTCTGGAGGGCCAAGTTGGGAAGTACCAAAAGGAAGAAAGGATGGTAGAATCTCAAAGGCTGCTGAAACTAGACAATTGCCAGCTCCAACTTTCAACATCTCCCAATTACAACAAAGCTTCTCTCGAAGAGGACTTTCTTTGCAAGATCTTGTTGCCCTCTCAGGAGGCCACACCCTGGGATTTGCTCATTGTTCATCCTTCCAAAACAGAATCCACAAATTCAGCTCCAAACAGAGCATTGATCCATCCTTAAACCCATCATTTGCAAAAACACTCCAAAGGAAATGCCACATTAAAAACAAGGTGAAAAATGCAGGGTCCCCATTGGATTCAAGTGCCACATATTTTGACAATGCTTATTACAAACTACTACTCCAAGGAAAAAGCATACTCTCTTCTGATCAAGCTCTACTCACTCACCCAACCACTAAAGCATTGGTTTCCAAATATGCTCATTCCCAACTGGAATTTGAAAGAGCTTTTGTCAAATCCATGATCAAGATGAGTAGCATTACCAATGGTGGACAAGAGATCAGGCTCCGATGCAATGTCGTTAGATAA 933 0.4159 MVMMVCLTCSINASTLSVNHYKHTCPQVESIVAGAVHKATLNDKTVPSALLRMHFHDCFIRGCDGSVLLKSKGKNKAEKDGPANISLHAFDVIEKAKKALEAICPGVVSCADILALAARDAVTLSGGPSWEVPKGRKDGRISKAAETRQLPAPTFNISQLQQSFSRRGLSLQDLVALSGGHTLGFAHCSSFQNRIHKFSSKQSIDPSLNPSFAKTLQRKCHIKNKVKNAGSPLDSSATYFDNAYYKLLLQGKSILSSDQALLTHPTTKALVSKYAHSQLEFERAFVKSMIKMSSITNGGQEIRLRCNVVR 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00173 310 PANTHER PEROXIDASE 25-RELATED 3 309 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu01g00173 310 PRINTS Haem peroxidase superfamily signature 173 188 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu01g00173 310 PRINTS Haem peroxidase superfamily signature 126 138 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu01g00173 310 PRINTS Haem peroxidase superfamily signature 233 248 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu01g00173 310 PRINTS Haem peroxidase superfamily signature 108 125 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu01g00173 310 PRINTS Haem peroxidase superfamily signature 47 61 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu01g00173 310 Pfam Peroxidase 35 277 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu01g00173 310 PRINTS Plant peroxidase signature 231 246 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu01g00173 310 PRINTS Plant peroxidase signature 107 117 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu01g00173 310 PRINTS Plant peroxidase signature 247 264 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu01g00173 310 PRINTS Plant peroxidase signature 126 141 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu01g00173 310 PRINTS Plant peroxidase signature 287 300 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu01g00173 310 PRINTS Plant peroxidase signature 49 69 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu01g00173 310 PRINTS Plant peroxidase signature 25 44 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu01g00173 310 PRINTS Plant peroxidase signature 88 101 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu01g00173 310 PRINTS Plant peroxidase signature 172 184 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu01g00173 310 ProSiteProfiles Plant heme peroxidase family profile. 15 310 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu01g00173 310 PANTHER PEROXIDASE 64 3 309 - -
Tsu01g00173 310 ProSitePatterns Peroxidases proximal heme-ligand signature. 173 183 IPR019793 -
Tsu01g00173 310 CDD secretory_peroxidase 16 309 IPR033905 GO:0004601|GO:0042744
Tsu01g00173 310 Gene3D - 19 309 - -
Tsu01g00173 310 Gene3D Peroxidase, domain 2 151 292 - -
Tsu01g00173 310 SUPERFAMILY Heme-dependent peroxidases 16 309 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g00173 Tsu-Chr1 1337584 1339070 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g00173 1 310 Peroxidase AT5G42180 70.000 1.32e-166 464
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g00173 K00430 - gmx:100820056 498.819
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g00173 01 1337584 1339070 Tsu01g00173 01 1337584 1339070 ECH